Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J05
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    26   0.28 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    26   0.28 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.0  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +2

Query: 242 HQMFQHKVRMLLQHKLPHHKVHHLYRTHQQ 331
           H M  H      QH  PHH+  H+    QQ
Sbjct: 165 HHMGHHMQEQHPQHHQPHHQQQHMMYGGQQ 194


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +2

Query: 242 HQMFQHKVRMLLQHKLPHHKVHHLYRTHQQ 331
           H M  H      QH  PHH+  H+    QQ
Sbjct: 167 HHMGHHMQEQHPQHHQPHHQQQHMMYGGQQ 196


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -2

Query: 216 IQYLFCLWFRIHRSFICCIFYCWFSILWYGLIAQTSRQR**TYKY 82
           IQ+     F     F+C  FY +F  L Y +    SR+    +KY
Sbjct: 65  IQFPISAHFSFMSRFLCLPFYSYFFYLSY-IYTTYSRKLSGIFKY 108


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -2

Query: 216 IQYLFCLWFRIHRSFICCIFYCWFSILWYGLIAQTSRQR**TYKY 82
           IQ+     F     F+C  FY +F  L Y +    SR+    +KY
Sbjct: 21  IQFPISAHFSFMSRFLCLPFYSYFFYLSY-IYTTYSRKLSGIFKY 64


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/50 (20%), Positives = 19/50 (38%)
 Frame = +1

Query: 244 SNVPTQSENXXXXXXXXXXXXXXXXNSPTNQTIPAKTNSNTTNSIVTDPK 393
           +N P+ + N                +SP ++ I   + SN   S+   P+
Sbjct: 129 NNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPR 178


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 275 LQHKLPHHKVHHLYRTHQQT 334
           +QH    HK HHL +  + T
Sbjct: 267 IQHGDDAHKTHHLDKNPENT 286


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/50 (20%), Positives = 19/50 (38%)
 Frame = +1

Query: 244 SNVPTQSENXXXXXXXXXXXXXXXXNSPTNQTIPAKTNSNTTNSIVTDPK 393
           +N P+ + N                +SP ++ I   + SN   S+   P+
Sbjct: 77  NNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPR 126


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/50 (20%), Positives = 19/50 (38%)
 Frame = +1

Query: 244 SNVPTQSENXXXXXXXXXXXXXXXXNSPTNQTIPAKTNSNTTNSIVTDPK 393
           +N P+ + N                +SP ++ I   + SN   S+   P+
Sbjct: 260 NNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPR 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,886
Number of Sequences: 336
Number of extensions: 2255
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)