Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J04
         (547 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31044| Best HMM Match : Cys_Met_Meta_PP (HMM E-Value=4.7e-05)       31   0.46 
SB_54964| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  
SB_54546| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)                29   1.9  
SB_49328| Best HMM Match : DUF1091 (HMM E-Value=1.6)                   29   1.9  
SB_21974| Best HMM Match : Ail_Lom (HMM E-Value=4.4)                   29   1.9  
SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8)                27   7.6  

>SB_31044| Best HMM Match : Cys_Met_Meta_PP (HMM E-Value=4.7e-05)
          Length = 157

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = -3

Query: 521 ITDP*FCHLFCSQPILLIXXXXXAPSLKFNFSKEASNTLTASSFSSECSSYGPSFKYTLF 342
           +T   F  +FC  PIL         SL     K  +  +      ++  + G S KYTL 
Sbjct: 4   VTSTPFAKIFCFMPILQDAPANIHASLDIQTYKNRNPDMADKKLDTQLVNAGRSKKYTLG 63

Query: 341 AMFSVI 324
           A+ SVI
Sbjct: 64  AVNSVI 69


>SB_54964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 138

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 358 KEGPYELHSELKEDAVKVFDASFEKL 435
           ++GP+ +   L+ED VK++D  F+K+
Sbjct: 19  EQGPFHVFLNLQEDVVKIYDFLFKKV 44


>SB_54546| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)
          Length = 848

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 358 KEGPYELHSELKEDAVKVFDASFEKL 435
           ++GP+ +   L+ED VK++D  F+K+
Sbjct: 19  EQGPFHVFLNLQEDVVKIYDFLFKKV 44


>SB_49328| Best HMM Match : DUF1091 (HMM E-Value=1.6)
          Length = 555

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 358 KEGPYELHSELKEDAVKVFDASFEKL 435
           ++GP+ +   L+ED VK++D  F+K+
Sbjct: 315 EQGPFHVFLNLQEDVVKIYDFLFKKV 340


>SB_21974| Best HMM Match : Ail_Lom (HMM E-Value=4.4)
          Length = 463

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 358 KEGPYELHSELKEDAVKVFDASFEKL 435
           ++GP+ +   L+ED VK++D  F+K+
Sbjct: 223 EQGPFHVFLNLQEDVVKIYDFLFKKV 248


>SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8)
          Length = 581

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +1

Query: 13  DIFLLIVTVSLFLSLPVKSSELTMDAKAISSAVAKFSAKFLNELDKSQNVVSSPLSA 183
           DI ++I+ +   ++   +SS L  DA  +SS   K + ++LN  DK+ N+     SA
Sbjct: 259 DIVIIIIIIITTITNHHRSSPL-FDAIELSSEPVKRAYQYLNGRDKNMNLDHFKFSA 314


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,490,138
Number of Sequences: 59808
Number of extensions: 222367
Number of successful extensions: 455
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)