Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J03
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 151 5e-38
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 31 0.090
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 30 0.21
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 29 0.36
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 0.64
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 28 0.64
SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2 |Sch... 28 0.84
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 0.84
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 27 1.5
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 1.9
SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr... 27 1.9
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 26 2.6
SPAC869.06c |||cation binding protein |Schizosaccharomyces pombe... 26 2.6
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 3.4
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 25 4.5
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 25 5.9
SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomy... 25 7.8
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.8
SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.8
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 25 7.8
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 25 7.8
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 25 7.8
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 151 bits (366), Expect = 5e-38
Identities = 72/131 (54%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
Frame = +1
Query: 91 DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVN 270
+G + + +E+L DE+ SRTRLL+N+IK+MKSE R++HE +KIKEN EKI N
Sbjct: 22 EGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNN 81
Query: 271 KTLPYLVSNVIELLDVDPQE-EEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDP 447
K LPYLV NV+E+LD+ P E + ++ A + ++ R GK AVIKTSTRQT FLP+IGLV+P
Sbjct: 82 KMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEP 141
Query: 448 DKLKPGDLVGV 480
++L PGDL+GV
Sbjct: 142 EELHPGDLIGV 152
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 31.1 bits (67), Expect = 0.090
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 166 DNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDG 345
DNE K MK E + + Q + ++ + ++K+K K ++ + EEEED
Sbjct: 89 DNEAKKMKREKEILRQQRQKRKSELTQLSQKVK-EKFKKMRKKPARRIVTIANDEEEEDD 147
Query: 346 AVVDLDS-QRKGKCAVIK 396
+D D+ +RK +K
Sbjct: 148 QTMDEDAFERKSMQGELK 165
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 29.9 bits (64), Expect = 0.21
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = +1
Query: 103 ALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLP 282
ALS+ + +PT+ +LL ++M ++ +++ D + E +K +++ LP
Sbjct: 406 ALSQIAVEIPTEVSKHHAQLLPLVFELMSTQGVKVGKSACNCIDALLEGLDKSEISGYLP 465
Query: 283 YLVSNVIELLD 315
L+ ++ LL+
Sbjct: 466 MLMERLVGLLE 476
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 29.1 bits (62), Expect = 0.36
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 202 RISHEHQAQNDKIK-ENTEKIKVNKTLPYLVSNVIELLD--VDPQEEEEDGAV 351
R+S EH A ++ + E+ + N+TL L N++E+ D DP ++ D ++
Sbjct: 579 RVSDEHSASSNFNEIESQASFEQNQTLDILSENIVEIQDKSTDPLQKSLDSSL 631
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.3 bits (60), Expect = 0.64
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 130 PTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIEL 309
P+ EI S+ DNE ++ + + IS+E+ +ND +E E N+ S+
Sbjct: 61 PSVEIRSKLVSPDNEANLLSDQNITISNENNNENDTTEE-AETSSGNEAADDEDSSSDAQ 119
Query: 310 LDVDPQEEEEDG-AVVDLDSQRK 375
V E DG + +LD +RK
Sbjct: 120 SSVPSFSEIHDGMSEEELDKERK 142
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 28.3 bits (60), Expect = 0.64
Identities = 28/130 (21%), Positives = 53/130 (40%)
Frame = +1
Query: 64 TLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIK 243
T E E +L EEV R PTD+ + D + + K+E + I Q ++IK
Sbjct: 702 TAEKPFTTEKPLSSLPEEVSRQPTDDKGEQVSNADVDSGLSKTERLTIQ-----QTNEIK 756
Query: 244 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFL 423
+ LP SN E + + + ++ L+SQ + +++ +
Sbjct: 757 HVPTNTTSSVKLPQQPSNEDEKERITTADYADSTSLERLESQEPNRNELVQVGSSNAGNT 816
Query: 424 PVIGLVDPDK 453
+G+ + +K
Sbjct: 817 TSVGMNEHEK 826
>SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 681
Score = 27.9 bits (59), Expect = 0.84
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 82 IWEDGEEALSEEVLRMPTDEIISRTRLLDN 171
++ DGE+ L E+ ++PT+ I S T DN
Sbjct: 324 LFVDGEKGLRSELSQIPTENIDSTTDRFDN 353
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 0.84
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +1
Query: 70 EDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKEN 249
+DK+ E E +S + + E I++ + NE+K+ K + + + N KE+
Sbjct: 824 QDKNQIETLNERISAAADELSSMESINKNQA--NELKLAKQKCSNLQEKINFGNKLAKEH 881
Query: 250 TEKI 261
TEKI
Sbjct: 882 TEKI 885
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 27.1 bits (57), Expect = 1.5
Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 46 QITMATTLEDKSIWEDGEEALSEEVLRMPTDEI--ISRTRLLDNEIKIMKSEVMRISHEH 219
Q+T+ +L+ D + L +L+ +DE+ I+ T L+DN ++ ++ +S +
Sbjct: 294 QLTICPSLQGFEF--DSKGNLDVSLLKSLSDEVNMITTTSLVDNTMEKTDADAASLSSDS 351
Query: 220 QAQNDKIKENTEKIKVNKTLPYL 288
+ I E++ ++ PY+
Sbjct: 352 DGEEGHIVHALEEMAYDEENPYV 374
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 1.9
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 166 DNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELL---DVDPQEEE 336
DN++ +++ +M + + N+K+ E + +KTL ++ S ++ L DV EE
Sbjct: 700 DNDMASLEAPMMSHNTDTDTLNNKLNEKDNVVFEDKTLQHVASEIVPNLPPADVGELNEE 759
>SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 1.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 310 LDVDPQEEEEDGAVVDLDSQRKGKCAVIKTST 405
++VD +EEED V D D VI ST
Sbjct: 250 VEVDDDDEEEDEVVTDDDGTSNADSEVITAST 281
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.2 bits (55), Expect = 2.6
Identities = 23/96 (23%), Positives = 46/96 (47%)
Frame = +1
Query: 67 LEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKE 246
+ED++I +DGE A++E+ R + S T+ ++K K+ + + N K
Sbjct: 152 IEDENIIDDGETAINEQKKR--EANVFSDTQSAP-QLKSGKALPADFENPYNLSNSKPVN 208
Query: 247 NTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV 354
N + +V V++ + +D PQE+ + +V
Sbjct: 209 NNNEDRVE-----AVTSENKSIDSAPQEKNHEYEIV 239
>SPAC869.06c |||cation binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 26.2 bits (55), Expect = 2.6
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +1
Query: 58 ATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDK 237
AT +++ +WE ++ EE++ P E + L E K M + HEHQ +
Sbjct: 53 ATRWQNQFVWELARHSVGEEIVVYPKFE-----KYLGEEGKEMAE---KDRHEHQLVKEM 104
Query: 238 I-KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 339
+ K + K + +P L ++E L EEE+
Sbjct: 105 LYKFQSMKANQSNFIPAL-DELMESLQKHIDEEEQ 138
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.8 bits (54), Expect = 3.4
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +1
Query: 160 LLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 339
L+D +IM++E R + + + I + + N +LP+ I+L+D + E
Sbjct: 1114 LIDGHSEIMENERRRPKYRIRLSGNPILGDGKSDNQNMSLPFYRGEYIQLIDANQDNYLE 1173
Query: 340 D 342
+
Sbjct: 1174 E 1174
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 25.4 bits (53), Expect = 4.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 201 HDFAFHYFNFVVQESCTADDFI 136
H++ H + +++E T DDFI
Sbjct: 207 HEYRIHNADILIREDITVDDFI 228
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 25.0 bits (52), Expect = 5.9
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 187 KSEVMRISHEHQAQNDKIKENTEK-IKVNKTLPYLVSNVIELLDVDPQEEEED 342
KSE+ R +HQ+ N+++KE +K +K +K + + + D + +EE ED
Sbjct: 3 KSELKR--KKHQSGNEEVKEKRQKPLKNDKKIAEELPQDED--DYEQEEENED 51
>SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 24.6 bits (51), Expect = 7.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 288 KVG*CFVHFNFLRVFFYFVVLS 223
KVG CF+ F L Y ++LS
Sbjct: 11 KVGCCFLIFGLLNNLLYVIILS 32
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 24.6 bits (51), Expect = 7.8
Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Frame = +1
Query: 88 EDGEEALSEEVLRMPTDEIISR---TRLLDNEIKIMKSEVMRI-SHEHQAQNDKIKENTE 255
E+G+ ++ + PTDEII++ + + + +I S + + I + +
Sbjct: 392 EEGDTNMTTNTILKPTDEIINKGYAYSITSSHSNHSNEKFEQIPSPDEKLSRTDIDTHVK 451
Query: 256 KIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVD--LDSQRK 375
+++ K+ L +E +P+EE D D +D++++
Sbjct: 452 QLQTTKSTDSLSIPFVESPQQNPEEELSDSLSNDFGIDAEKE 493
>SPAC17A2.08c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 24.6 bits (51), Expect = 7.8
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 205 ISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLD 363
++ + Q Q K +EK++ + + S + E L+++ QEE+ + +DLD
Sbjct: 206 LTMDEQIQRLKEAIASEKLQQEERSQIIKSLMEEELEINEQEEKIKHSFIDLD 258
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 67 LEDKSIWEDG---EEALSEEVLRMPTDEIISRTRLLDNEIKI 183
+ DK WE+ +E + R+PTD+ +++ N +K+
Sbjct: 462 VHDKKSWEEMNAIQEYFQRPITRVPTDDYEELEKVVKNALKM 503
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 24.6 bits (51), Expect = 7.8
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 73 DKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENT 252
DKS ++ E+ L L + +ISR + K SE+ Q QN+ K++
Sbjct: 139 DKSFRKNMEDELRITRLASENNVLISRI----DRTKRHFSELFTQKQMLQLQNENFKDDY 194
Query: 253 EKIK-VNKTL 279
EKIK NK L
Sbjct: 195 EKIKEENKRL 204
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 253 EKIKVNKTLPYLVSNVIELLDVDPQEEEED 342
+++ + TLPY V E+L + QEE+ D
Sbjct: 346 DRMLIISTLPYSHEEVKEILKIRCQEEDVD 375
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,867,352
Number of Sequences: 5004
Number of extensions: 37997
Number of successful extensions: 156
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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