Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J03
(481 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 173 5e-44
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 165 2e-41
04_03_0179 - 12304726-12304782,12305509-12305601,12305729-123058... 47 9e-06
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 31 0.49
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 30 0.85
09_02_0289 - 6941154-6941399,6941630-6941722,6941801-6941884,694... 29 1.5
10_08_1033 - 22444757-22444862,22444965-22445542 29 2.0
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 29 2.6
07_03_0584 - 19690474-19690589,19690763-19690909,19691068-196911... 28 3.4
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 28 4.5
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 28 4.5
03_05_0836 - 28088832-28089422,28089626-28089831,28089985-28090330 28 4.5
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 28 4.5
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 6.0
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 27 6.0
11_06_0230 + 21528384-21528908,21529017-21529150,21530109-215301... 27 7.9
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 173 bits (422), Expect = 5e-44
Identities = 79/129 (61%), Positives = 107/129 (82%), Gaps = 1/129 (0%)
Frame = +1
Query: 97 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKT 276
++A +++ M T++I+ TRLLDNE +++K E+ R + E ++ +KIKEN EKIK+NK
Sbjct: 4 DDADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQ 63
Query: 277 LPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPDK 453
LPYLV N++E+L+++P++E EEDGA +DLDSQRKGKC V+KTSTRQT FLPVIGLVDP+K
Sbjct: 64 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEK 123
Query: 454 LKPGDLVGV 480
LKPGDLVGV
Sbjct: 124 LKPGDLVGV 132
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 165 bits (400), Expect = 2e-41
Identities = 78/129 (60%), Positives = 105/129 (81%), Gaps = 1/129 (0%)
Frame = +1
Query: 97 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKT 276
++A +++ M T++I+ +RLLDNEI+ E+ R + E ++ +KIKEN EKIK+NK
Sbjct: 4 DDAEDDQLASMSTEDIVRASRLLDNEIR---DELQRTNLELESFKEKIKENQEKIKLNKQ 60
Query: 277 LPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPDK 453
LPYLV N++E+L+++P++E EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVDPDK
Sbjct: 61 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDK 120
Query: 454 LKPGDLVGV 480
LKPGDLVGV
Sbjct: 121 LKPGDLVGV 129
>04_03_0179 -
12304726-12304782,12305509-12305601,12305729-12305833,
12306715-12306793,12307297-12307415,12307728-12307919,
12308158-12308277,12309542-12309613,12310157-12310246,
12310402-12310485
Length = 336
Score = 46.8 bits (106), Expect = 9e-06
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +1
Query: 172 EIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEE-EDGA 348
E+ +K + + E N ++ + I+ N+ YLV V+ +++ P++E ED
Sbjct: 16 EVDRLKKRIRTLEMEETKLNQHMERVIQGIEANEA--YLVGMVLRIMEKGPEDETAEDDC 73
Query: 349 VVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPDKLKPGDLVGV 480
V QRK F P+ G+V P KLKPGDL+GV
Sbjct: 74 DVGFHLQRK------------IIFRPIAGVVYPSKLKPGDLIGV 105
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 31.1 bits (67), Expect = 0.49
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = +1
Query: 91 DGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKE-----NTE 255
DG ++ E+ L+ DE+ S + + + + SEV ++ H N +I+ N +
Sbjct: 782 DGNNSVLEK-LKQAWDELNSESENIKQALDVKNSEVDKLKHALDENNSEIENLKHTLNEK 840
Query: 256 KIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIG 435
+ +K + + +E+ ++ + + A+ DL Q + + + S Q L +I
Sbjct: 841 NSETDKLKQDIDATYMEMENLKYEIASRESAITDLREQVEHLSSQVTHS--QKLQLDIIS 898
Query: 436 LVD 444
L+D
Sbjct: 899 LID 901
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 30.3 bits (65), Expect = 0.85
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +1
Query: 34 IENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMR--- 204
+++ Q+ MA +DKS + LS +V DE+++ LLDNEI+++ SE R
Sbjct: 531 VDSLQVVMANAQQDKSFSRN----LSLQVHVAAVDEMLN---LLDNEIQLLHSEHSRTRE 583
Query: 205 --ISHEHQAQNDKIKENTEKIKVNKTLPYLV 291
H Q D+ + +K K L L+
Sbjct: 584 LSAHHAKQVLEDQDWNSQQKAKSITELDELI 614
>09_02_0289 -
6941154-6941399,6941630-6941722,6941801-6941884,
6947011-6947146,6947310-6947455,6947826-6948051,
6948595-6948677,6949004-6949198,6949276-6949374,
6949762-6949875,6949949-6950036,6950353-6950558,
6950850-6950902,6951074-6951377,6952195-6952283,
6952675-6953052,6953665-6953726,6954124-6954189,
6955126-6955205
Length = 915
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 186 HYFNFVVQESCTADDFISRHTKDFLAKRFFSILPN 82
H F V CTAD +++ H D+L K I PN
Sbjct: 637 HVFPNKVLVDCTADTYVACHYYDWLKKGIHVITPN 671
>10_08_1033 - 22444757-22444862,22444965-22445542
Length = 227
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 211 HEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAV 390
H HQ Q ++ T + ++ P S+ + LL D EE+ VVD + KG
Sbjct: 34 HHHQQQQQSLRRATSDADIARSAPATASSPLPLLLRDILEEDV-VVVVDGAGRGKGNDDD 92
Query: 391 IKTSTR 408
KTS R
Sbjct: 93 DKTSGR 98
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/102 (21%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Frame = +1
Query: 70 EDKSIWEDGE---EALSEEVLRMPTDE---IISRTRLLDNEIKIMKSEVMRISHEHQAQN 231
E K++ ED E L E+L + + E ++S+ + L++ +KI+ + + E
Sbjct: 1399 ETKAMLEDKSKVIEGLEHEILLLNSSEEGRLMSQIKELNDNLKIISIDKGNLEEEILKLT 1458
Query: 232 DKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVD 357
DK++ + N+ E+ V +E+EE+ +++
Sbjct: 1459 DKLEMAVALAEENEAASIEARQAAEISKVYAEEKEEEVRILE 1500
>07_03_0584 -
19690474-19690589,19690763-19690909,19691068-19691116,
19691240-19691365,19691473-19692651
Length = 538
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 235 KIKENTEKIKVNKTLPY-LVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIK 396
KIK ++IK K L L+ N++E + EEE A D + C++ K
Sbjct: 195 KIKSTLQRIKDRKALSVDLLDNLVEFTNRWTIEEETAAAAASADPPQNPICSIAK 249
>10_08_0765 -
20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 79 SIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKI 183
S+W+ + LSE VL D+I+++ L D KI
Sbjct: 61 SLWQWRSQGLSEVVLSWSVDQILNKDLLRDKVAKI 95
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 115 EVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKE 246
E L+ +DE R + ++ +K+ + E+MR+ E Q +++KE
Sbjct: 161 EKLQKTSDEQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLKE 204
>03_05_0836 - 28088832-28089422,28089626-28089831,28089985-28090330
Length = 380
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = +1
Query: 79 SIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEK 258
++ +DG ALS V+ + DE++ + ++ I KS + ++ H ++ I++ + K
Sbjct: 304 ALGDDGSIALSRNVVVLHVDEMLLLKFFVYDDDMISKSAPIILTLGHNDESFNIEQGSYK 363
Query: 259 IKV 267
++V
Sbjct: 364 LRV 366
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 163 LDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIK 264
LDN + +++EV +S + QA +++I + EK++
Sbjct: 242 LDNGLSALQAEVENLSLKEQALDERISDMREKLR 275
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 301 IELLDVDPQEEEEDGAVVDL 360
++L D D +EEEE+GAV D+
Sbjct: 236 LDLEDFDDEEEEEEGAVGDI 255
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 301 IELLDVDPQEEEEDGAVVDL 360
++L D D +EEEE+GAV D+
Sbjct: 225 LDLEDFDDEEEEEEGAVGDI 244
>11_06_0230 +
21528384-21528908,21529017-21529150,21530109-21530158,
21530194-21530726
Length = 413
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 166 DNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEE 333
DN K+ S + ++H+ A N I+ +K +P ++ + LL P E
Sbjct: 285 DNSKKLFYSRMFGVNHKDAADNQSIEVTKNILKKCGGVPLSITTIASLLIDKPMGE 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,514,196
Number of Sequences: 37544
Number of extensions: 221125
Number of successful extensions: 700
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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