Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J03
(481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 2e-48
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 36 0.023
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 33 0.16
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 33 0.16
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.37
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_2860| Best HMM Match : IncA (HMM E-Value=0.41) 30 1.1
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 29 1.5
SB_11923| Best HMM Match : Toxin_3 (HMM E-Value=0.32) 29 1.5
SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_4536| Best HMM Match : Krr1 (HMM E-Value=4) 29 2.0
SB_54446| Best HMM Match : PilO (HMM E-Value=2.9) 29 2.6
SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 29 2.6
SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 28 3.5
SB_47959| Best HMM Match : rve (HMM E-Value=3e-29) 28 4.6
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0) 28 4.6
SB_29265| Best HMM Match : OmpH (HMM E-Value=3) 28 4.6
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 28 4.6
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 28 4.6
SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_42677| Best HMM Match : TUDOR (HMM E-Value=0) 27 6.1
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_16977| Best HMM Match : Involucrin (HMM E-Value=0.012) 27 6.1
SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 27 8.0
SB_32331| Best HMM Match : DivIVA (HMM E-Value=0.86) 27 8.0
SB_23940| Best HMM Match : MuDR (HMM E-Value=0.24) 27 8.0
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 27 8.0
SB_11628| Best HMM Match : DUF1014 (HMM E-Value=0.64) 27 8.0
SB_52390| Best HMM Match : Cauli_DNA-bind (HMM E-Value=6.4) 27 8.0
SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_33998| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-19) 27 8.0
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 27 8.0
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 27 8.0
SB_1692| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 188 bits (459), Expect = 2e-48
Identities = 104/143 (72%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Frame = +1
Query: 55 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQND 234
MA TLEDK+IW DGEE + EEVLRM TDEI+SR RLLDNEI
Sbjct: 1 MAATLEDKAIWGDGEE-MGEEVLRMSTDEIVSRARLLDNEI------------------- 40
Query: 235 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQE-EEEDGAVVDLDSQRKGKCAVIKTSTRQ 411
KEN+EKIKVNKTLPYLVSNVIELLDVDPQ+ EEDGA VDLDSQRKGKCAVIKTSTRQ
Sbjct: 41 --KENSEKIKVNKTLPYLVSNVIELLDVDPQDYAEEDGANVDLDSQRKGKCAVIKTSTRQ 98
Query: 412 TYFLPVIGLVDPDKLKPGDLVGV 480
TYFLPVIGLV+P+ L PGDLVGV
Sbjct: 99 TYFLPVIGLVEPENLTPGDLVGV 121
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 35.5 bits (78), Expect = 0.023
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Frame = +1
Query: 19 SIQN*IENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEV 198
S+QN +E ++ T LE + E L++ L M + + L+N ++ +++++
Sbjct: 796 SLQNKLERSEFETRTRLEGQVEALQKESNLAKRQLEMDNTHHKNLIKTLENRVQELQTQI 855
Query: 199 MRISHEHQAQNDKIKENTEKI--------KVNKTLPYLVSNVIELLDVDPQEEEEDGAVV 354
S +Q D + NT+++ +V L V ELL +P ++
Sbjct: 856 DTESRSNQQARDMLVRNTKEMERLEFKNTEVKAQLEAAEKRVHELLSKEPSSDQ------ 909
Query: 355 DLDSQRKGKCAVIKTSTRQT 414
D+D RK KT + T
Sbjct: 910 DIDKMRKETEEKFKTDLQDT 929
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 32.7 bits (71), Expect = 0.16
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Frame = +1
Query: 73 DKSIWEDGEEALSEEVLRMPT--DEI------ISRTRLLDNEIKIMKSEVMRISHEHQAQ 228
D+ WE+ ++ L M T DE +S E K++K V ++S AQ
Sbjct: 391 DREEWEEEQKRLDRAWYDMDTGYDETQNPFADVSEEYTKKKEEKLIKKAVKKMS----AQ 446
Query: 229 NDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL 360
+I ++ + + N+ L S V++ LDVD EEE+ A V L
Sbjct: 447 QRQINKDNDMWETNRML---TSGVVQKLDVDEDFEEENEAKVHL 487
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 32.7 bits (71), Expect = 0.16
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 67 LEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKE 246
+ ++ + E+ E EE +++ + + E+++M + + HE + +++IKE
Sbjct: 2909 ISEEELLEEVEVQRVEEGASHDLEDVPALKESYEEEVEVM---AVGLKHEERVNDEEIKE 2965
Query: 247 NTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL--DSQRKGK 381
EKI +++ N+I+ L+ +EE E AV + +R+GK
Sbjct: 2966 KDEKIHLDE------ENIIQDLEETFEEELEVSAVETSKNEDERRGK 3006
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 31.9 bits (69), Expect = 0.28
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +1
Query: 79 SIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKI--MKSEVMRISHEHQAQNDKIKENT 252
S W+D +L EV ++ D+ + +++D+E ++ ++S + + D +K +
Sbjct: 2603 SDWKDQASSLQSEVAQLKKDKAAAMHKVIDSEEQMIQLRSRLYKTEDSLVRNQDTVKLLS 2662
Query: 253 EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 408
K N L + + L V E ++ +VD + + K KC V+ T T+
Sbjct: 2663 ---KENTDLRVEIERLRSRLSVYASETAKE--IVDGNGEGKAKCGVV-TKTK 2708
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/84 (22%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 136 DEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNK-TLPYLVSNVIELL 312
+ + S R +NEI +K+ + R+ E ++ +++ ++EKI ++ + L ++ +
Sbjct: 105 ESVTSELRGRENEIAELKTSIGRLESELRSLKSELQNSSEKISEDEHEISQLKNDKARCM 164
Query: 313 -DVDPQEEEEDGAVVDLDSQRKGK 381
++ + E+ + VVDL RK +
Sbjct: 165 QELRDEREKSNKLVVDLQKTRKAQ 188
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 30.7 bits (66), Expect = 0.65
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 88 EDGEEALSEEVL--RMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKI 261
EDG E L E++ R E+ R + L+ E +++ +V + ++ + KIK+ EK+
Sbjct: 408 EDGTE-LEEKIRSQRNRITELERRVKELEKEKNLLEQQVKTMKNKSDDDDKKIKDLNEKV 466
Query: 262 KVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 375
+V + L N E+ + E + + DL + K
Sbjct: 467 RVLE--KQLKENDAEIQGLKDDNERLEDELEDLSTTIK 502
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 136 DEIISRTRLLDNEIKIMKSEVMRISHE-HQAQNDKIKENTEKIKVNKTLPYLVSNVIELL 312
DE++ + L ++ ++ EV ++ E +A + IK+ TEK+ N + ++EL
Sbjct: 716 DELMKQNESLRKKVSKLEDEVRFLNDELREADSSSIKD-TEKL--NAEIREFKKKIVELE 772
Query: 313 D-VDPQEEE 336
VD QEEE
Sbjct: 773 KLVDDQEEE 781
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 30.3 bits (65), Expect = 0.86
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 235 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQR 372
K+K ++ + NKT + N +E D +P+E EED V D++R
Sbjct: 510 KLKSKMKRSEKNKTEELVAVNKVETDDDNPEETEEDSGNVS-DTER 554
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 30.3 bits (65), Expect = 0.86
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 193 EVMRISHEHQAQNDKIKENTEKIK-VNKTLPYLVSNVIELLD 315
E+ + +E + Q + IKEN EK+K K + L +IEL D
Sbjct: 612 EITELENELEEQREIIKENEEKLKEKEKEIEKLKKKIIELSD 653
>SB_2860| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 417
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 112 EEVLRMPTDEIISRTRLL-DNEIKIMKSEVMRISHEHQAQNDKIKENTEKIK 264
EE L+ ++ R RLL DNE K+M+ + + +H+ + ++KE ++K
Sbjct: 127 EEKLKQSMADLEKRERLLSDNEAKVMRLKE-ELQRDHERKMTELKEAARRMK 177
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 64 TLEDKSIWEDGEEALSEEVLRMPTDEIISRTR-LLDNEIKIMKSEVMRISHEHQAQNDKI 240
TL+D+ W + E + + + DE++S R + I I V I +A
Sbjct: 502 TLDDEQGWVEPEPEVDAKRSCLKDDELLSMVRNIKAAHITITGEPVPEIEERMRAMTTAS 561
Query: 241 KENTEKIKVN 270
EN E +K+N
Sbjct: 562 NENKELVKLN 571
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 163 LDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVI---ELLDVDPQ 327
++NE K+ ++ V ++H+ + D E E I++ PY + +V+ EL+ V P+
Sbjct: 191 VENEEKVYEALVRWVNHDLSQRRDLFPELLELIRLPLVSPYYLVDVVEKEELMTVSPR 248
>SB_11923| Best HMM Match : Toxin_3 (HMM E-Value=0.32)
Length = 884
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/112 (24%), Positives = 48/112 (42%)
Frame = +1
Query: 40 NTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEH 219
NT+ ED D E E R R L+ ++ MK E +
Sbjct: 622 NTETGKLNGDEDNHSGTDAETFNKMEAEYRNCQPFSMRKRQLNILLEKMKGERSLRQQLN 681
Query: 220 QAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 375
+A+ K+ ++ K V+ +P+ N++ELL DP++ + +V+L R+
Sbjct: 682 KARKSKMLKSRSKRLVDLGVPH---NLMELLPEDPEDPMPEEIIVELGRIRE 730
>SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +1
Query: 97 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEK 258
+ A+ E++ D +S R+ +NE+++ KSE + +Q K + E+
Sbjct: 121 QTAIQLEIVNFNDDSFVSGNRMSNNEVRVTKSESLSSPSNSYSQAFKSNNSREE 174
>SB_4536| Best HMM Match : Krr1 (HMM E-Value=4)
Length = 246
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = +1
Query: 151 RTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQE 330
R R L+ ++ MK E ++A+ K+ ++ K V+ +P+ N++ELL DP++
Sbjct: 93 RKRQLNILLEKMKGERSLRQQLNKARKSKMLKSRSKRLVDLGVPH---NLLELLPEDPED 149
Query: 331 EEEDGAVVDLDSQRK 375
+ +V+L R+
Sbjct: 150 AMPEEIIVELGRIRE 164
>SB_54446| Best HMM Match : PilO (HMM E-Value=2.9)
Length = 261
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = +1
Query: 151 RTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQE 330
R R L+ ++ MK E ++A+ K+ ++ K V+ +P+ N++ELL DP++
Sbjct: 76 RKRQLNILLEKMKGERSLRQQLNKARKSKMLKSRSKRLVDLGVPH---NLMELLPEDPED 132
Query: 331 EEEDGAVVDLDSQRK 375
+ +V+L R+
Sbjct: 133 AMPEEIIVELGRIRE 147
>SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++D+ PQ+EEEDG V++
Sbjct: 527 DIVDLQPQDEEEDGEVIE 544
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++D+ PQ+EEEDG V++
Sbjct: 982 DIVDLQPQDEEEDGEVIE 999
>SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++D+ PQ+EEEDG V++
Sbjct: 22 DIVDLQPQDEEEDGEVIE 39
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 64 TLEDKSIWEDGEEALSEEVLRMPTDE---IISRTRLLDNEIKIMKSEVMRISHEHQAQ 228
+L+ +S ++ E+ EE T + + R RLL +++ K E R+ HE + Q
Sbjct: 2501 SLKQRSSSKEDEQKSEEETSMTETSDYSDVEGRVRLLKEQLEQRKREAQRLYHERKRQ 2558
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 58 ATTLEDKSIWEDGEEALSEE--VLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQN 231
A LE+K + E+ E +S E V P ++ I+R E+K K + M +H +
Sbjct: 5159 AKPLEEKHLVEEKELPVSAEKVVEEKPLEKPITRKEDKVEEVKPKKEKPMEREAQHLEEK 5218
Query: 232 DKIKENTEKIKVNKTL 279
+KE + K +
Sbjct: 5219 PLLKEKELPVSAEKAI 5234
>SB_47959| Best HMM Match : rve (HMM E-Value=3e-29)
Length = 622
Score = 27.9 bits (59), Expect = 4.6
Identities = 28/132 (21%), Positives = 56/132 (42%)
Frame = +1
Query: 67 LEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKE 246
LE + ED E+ ++ + + +DNE + K + +I + N+K+K+
Sbjct: 472 LEQEEQLEDNPTVPLEQEEQLEDNPTVPLEEHIDNEGRKCKRQ--KICESQKTYNEKMKK 529
Query: 247 NTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLP 426
T+K K K Y + I++ D + ++ ++ +K T+ F
Sbjct: 530 QTQKAKKFKFNVYDIV-AIQIHKSDKVSKLHPNMLIGKITEIDSTSNYVKVVTQ---FGI 585
Query: 427 VIGLVDPDKLKP 462
+ GL+ P +L P
Sbjct: 586 IKGLIAPTRLNP 597
>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
Length = 768
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 244 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 348
E ++ + ++T P N +E V P+ EEEDGA
Sbjct: 56 EGEKEDEASETSPRGSENSVESRSVSPKNEEEDGA 90
>SB_29265| Best HMM Match : OmpH (HMM E-Value=3)
Length = 218
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 307 LLDVDPQEEE--EDGAVVDLDSQ--RKGKCAVIKTSTRQTYFLPVIGLVD 444
L D D E E +D VD++++ KGK K+S + Y PV+ L D
Sbjct: 25 LCDTDAPEAEVVDDEPEVDVETETEEKGKAETKKSSEPEEYTPPVVALED 74
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 27.9 bits (59), Expect = 4.6
Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Frame = +1
Query: 34 IENTQITMATTLEDKSIWEDGEEALSE--EVLRMPTDEIISRTRLLDNEIKIMKSEVMRI 207
+E + TL K I + L +VLR + + + IK KS
Sbjct: 212 VETSSKNNTDTLHPKMIPKKDNNTLKHGHQVLRKTKNHTKTPQQAKKKRIKHTKSSSADS 271
Query: 208 SHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCA 387
S +++ ++ K+K N ++K K L ++ + D ++ E + + + + ++K K
Sbjct: 272 SDDYEVESIKVKVNFSELK--KALQTFSPEILRKVKHDLEKMEREKKLGEKEKKKKVKVL 329
Query: 388 VIKTSTRQ 411
+ +T + Q
Sbjct: 330 LDETISVQ 337
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 94 GEEALSEEVLRMPTDEIISRTRLLDNEIKIMKS-EVMRISHEHQAQNDKIKENTEKIK 264
G + +S++ L++ + R + + IK ++ + I H N +I++ EKIK
Sbjct: 47 GNKNISKDDLKVKIERAAERKKKQEENIKARQAAKAAHIKHVQDLANQQIRQTEEKIK 104
>SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 82 IWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHE 216
I E +E ++ R+ EIIS+T +L ++IK + VMRI E
Sbjct: 196 IIEGKKEFKLADLGRVTLKEIISKTSVLVSDIKGSRESVMRIPME 240
>SB_42677| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 1150
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 153 YKTPGQRN*NNEKRSHEDFPRTSSSKRQNKRK 248
+KTP Q N + + E+ P T + Q+KRK
Sbjct: 108 HKTPRQCEGNRDSKEEENSPGTKAKDDQSKRK 139
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 310 LDVDPQEEEEDGAVVDLDSQRKGKCAVIKTS-TRQTY 417
+D P+E + DGAVV++ S +G V ++S +RQ+Y
Sbjct: 477 MDEVPEEMDSDGAVVNIQSAMRGH--VTRSSLSRQSY 511
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 27.5 bits (58), Expect = 6.1
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Frame = +1
Query: 112 EEVLRMPTDEIISR---TRLLDNEIKIMKSEVMRISHEHQAQND------KIKENTEKIK 264
EE LR +E+ R LDNE+ ++++ + + D ++ E E+ K
Sbjct: 909 EEKLRRTEEELKDRDGQVAKLDNELTKLQNDFQDTITQLKTLEDLLDTSKRVVEEKEQ-K 967
Query: 265 VNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 411
V + L +V EL D +E+DG + +LD K IK Q
Sbjct: 968 VTELDKLLNESVDELQQKDKSLKEKDGKLAELDQALKESRKEIKNREAQ 1016
>SB_16977| Best HMM Match : Involucrin (HMM E-Value=0.012)
Length = 247
Score = 27.5 bits (58), Expect = 6.1
Identities = 28/132 (21%), Positives = 56/132 (42%)
Frame = +1
Query: 67 LEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKE 246
LE + ED E+ ++ + + +DNE + K + +I + N+K+K+
Sbjct: 97 LEQEEQLEDNPTVPLEQEEQLEDNPTVPLEEHIDNEGRKCKRK--KICESQKTYNEKMKK 154
Query: 247 NTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLP 426
T+K K K Y + I++ D + ++ ++ +K T+ F
Sbjct: 155 QTQKAKKFKFNVYDIV-AIQIHKSDKVSKLHPNMLIGKITEIDSTSNYVKVVTQ---FGI 210
Query: 427 VIGLVDPDKLKP 462
+ GL+ P +L P
Sbjct: 211 IKGLIAPTRLNP 222
>SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/53 (20%), Positives = 26/53 (49%)
Frame = +1
Query: 88 EDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKE 246
+ E+ + R P D + ++++ E+K+ K+ + H ++ D+ KE
Sbjct: 309 QKSEKEVDASSERAPKDNKVRKSKIKTEELKVPKALEREVGHAKTSKKDESKE 361
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 64 TLEDKSIWED---GEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQND 234
+LE+K +D E S E DE++ R L +E+K +K E + + ++ N
Sbjct: 682 SLEEKIRLKDVVIDELKTSLETCSKERDELVESNRNLGSELKALKKENEELVSQVESLNQ 741
Query: 235 KIKE 246
K+++
Sbjct: 742 KVEQ 745
>SB_32331| Best HMM Match : DivIVA (HMM E-Value=0.86)
Length = 888
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++++ PQ+EEEDG V++
Sbjct: 684 DIVELQPQDEEEDGEVIE 701
>SB_23940| Best HMM Match : MuDR (HMM E-Value=0.24)
Length = 685
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++D+ PQ++EEDG V++
Sbjct: 514 DIVDLQPQDKEEDGEVIE 531
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 37 ENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHE 216
+ T+ T E+K ++ ++ E + T E +T+ ++ K K + +
Sbjct: 462 DKTKENKDKTKENKDKTKENKDKTKEN--KDKTKENKDKTKNNKDKTKENKDKTNENKDK 519
Query: 217 HQAQNDKIKENTEKIKVNKT 276
+ DK KEN K K NKT
Sbjct: 520 TKENKDKTKENKNKTKENKT 539
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 76 KSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTE 255
KS+ + G+ + DE+ R L+ E+K +KSE + Q N ++
Sbjct: 224 KSLKKGGDLLFPGASYKRKLDEVAGRLDELEREVKRLKSETCQTKMTCQPCNHQLLMVGP 283
Query: 256 KIKVNKTLP 282
+ + TLP
Sbjct: 284 TVPIPPTLP 292
>SB_11628| Best HMM Match : DUF1014 (HMM E-Value=0.64)
Length = 423
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 210 PRTSSSKRQNKRKHGEN*SEQNT 278
P+ S KRQNK K E ++NT
Sbjct: 55 PKVRSKKRQNKNKEDEEKKKENT 77
>SB_52390| Best HMM Match : Cauli_DNA-bind (HMM E-Value=6.4)
Length = 232
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++D+ PQ++EEDG V++
Sbjct: 153 DIVDLQPQDKEEDGEVIE 170
>SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++D+ PQ++EEDG V++
Sbjct: 1041 DIVDLQPQDKEEDGEVIE 1058
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +1
Query: 304 ELLDVDPQEEEEDGAVVD 357
+++D+ PQ++EEDG V++
Sbjct: 1111 DIVDLQPQDKEEDGEVIE 1128
>SB_33998| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-19)
Length = 331
Score = 27.1 bits (57), Expect = 8.0
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -2
Query: 429 NW*EVSLTCRGFDNCAFSFTLRVKVHYSTVFLLFLRIHVQQFNNVGNKVG*CFVHFNFLR 250
NW +SL F F+FT + YSTV L+ H+ F N C + F F
Sbjct: 64 NWFVLSLAIADFLVGFFTFTNAIICRYSTV--LYEVCHLPDFYYAQN----CLMSFFFTA 117
Query: 249 VFFYFVVLSL-MFVGNPHDFAFHYF 178
L+L +++G H + + F
Sbjct: 118 SVMNLCALTLDIYLGVLHPYRYQSF 142
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +1
Query: 136 DEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLD 315
+E +R L +E + SE+ + HQ + ++ EK++V +I L
Sbjct: 1687 EEYNTRMSALASENDHLNSELEMVKQSHQEMEKEKRKLQEKLRVT------TDELIRLKP 1740
Query: 316 VDPQEEEEDGAV-VDLDSQRKGKCAVIKTSTRQT 414
V +++ G V +L + RK + A ++T+ R++
Sbjct: 1741 VSEATQKKKGQVETELQNARK-RLATLETTERKS 1773
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 358 GPLQHRLPPLLEDPRPT 308
G L+ R PPL+EDPR T
Sbjct: 403 GSLRIRSPPLIEDPRET 419
>SB_1692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 43 TQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQ 222
T+ A ++ +IW +G E L V P D++ +T +E M+ +V+R+ E
Sbjct: 8 TRGASAGDIQAHTIWIEGPEFLRLPVHAWPIDDV--QTTAPPSEKSEMRKKVLRVQQEAD 65
Query: 223 A 225
A
Sbjct: 66 A 66
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,535,955
Number of Sequences: 59808
Number of extensions: 270307
Number of successful extensions: 1084
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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