Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J03
(481 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 170 5e-43
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 163 7e-41
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 33 0.13
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 33 0.13
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 32 0.23
At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 31 0.40
At5g46410.1 68418.m05712 NLI interacting factor (NIF) family pro... 30 0.70
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 30 0.70
At5g27500.1 68418.m03287 hypothetical protein hypothetical prote... 29 1.6
At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 29 1.6
At5g07220.1 68418.m00823 BAG domain-containing protein contains ... 29 1.6
At1g44780.1 68414.m05130 expressed protein ; expression supporte... 29 2.1
At5g06850.1 68418.m00774 C2 domain-containing protein contains I... 28 2.8
At4g13380.1 68417.m02091 heavy-metal-associated domain-containin... 28 2.8
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 28 3.7
At3g25840.1 68416.m03219 protein kinase family protein contains ... 28 3.7
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 27 5.0
At4g03590.1 68417.m00494 hypothetical protein 27 5.0
At3g04830.2 68416.m00524 expressed protein 27 5.0
At3g04830.1 68416.m00523 expressed protein 27 5.0
At2g30500.1 68415.m03715 kinase interacting family protein simil... 27 5.0
At5g46580.1 68418.m05735 pentatricopeptide (PPR) repeat-containi... 27 6.5
At5g46280.1 68418.m05697 DNA replication licensing factor, putat... 27 6.5
At5g27650.1 68418.m03313 PWWP domain-containing protein hypothet... 27 6.5
At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransfera... 27 6.5
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 27 6.5
At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containi... 27 6.5
At1g60640.1 68414.m06826 expressed protein 27 6.5
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 27 6.5
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 27 6.5
At3g54630.1 68416.m06044 expressed protein weak similarity to re... 27 8.7
At3g53540.1 68416.m05912 expressed protein 27 8.7
At3g48440.1 68416.m05288 zinc finger (CCCH-type) family protein ... 27 8.7
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 27 8.7
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 170 bits (413), Expect = 5e-43
Identities = 79/132 (59%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 88 EDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKV 267
ED +++ M T++I TRLLDNEI+I+K + R + E + +KIKEN EKIK+
Sbjct: 7 EDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKL 66
Query: 268 NKTLPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVD 444
NK LPYLV N++E+L+++P+++ EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVD
Sbjct: 67 NKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVD 126
Query: 445 PDKLKPGDLVGV 480
PD LKPGDLVGV
Sbjct: 127 PDSLKPGDLVGV 138
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 163 bits (395), Expect = 7e-41
Identities = 76/124 (61%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
Frame = +1
Query: 112 EEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLV 291
+++ M TD+I +RLL NEI+I+K E R + + ++ +KIKEN EKIK+NK LPYLV
Sbjct: 14 DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLV 73
Query: 292 SNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPDKLKPGD 468
N++E+L++ P+++ EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVDPD LKPGD
Sbjct: 74 GNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGD 133
Query: 469 LVGV 480
LVGV
Sbjct: 134 LVGV 137
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/92 (22%), Positives = 45/92 (48%)
Frame = +1
Query: 97 EEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKT 276
++ ++ +R E + + + ++K+M + + + E QA + +I E +EK+K K
Sbjct: 218 DKVIANAAMRAKIKESMGQKDDIQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKD 277
Query: 277 LPYLVSNVIELLDVDPQEEEEDGAVVDLDSQR 372
++ N EL V + ++ + DL QR
Sbjct: 278 EITVLEN--ELKTVSEKRDKAYSNIHDLRRQR 307
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 32.7 bits (71), Expect = 0.13
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 169 NEIKIMKSEVMRISHEHQAQNDKIKENTEKI-KVNKTLPYLVSNVIELLDVDPQEEEEDG 345
NE++I+K E + E + + DK+ E + K K L LV + + ++D E+E G
Sbjct: 267 NEMEIVKIEQKGVIEELERKLDKLNETVRSLTKEEKVLRDLVIGLEK--NLDESMEKESG 324
Query: 346 AVVDLDSQRKGKCAVIKTS 402
+V++D+ GK IK S
Sbjct: 325 MMVEIDA--LGKERTIKES 341
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/80 (22%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 46 QITMATTLEDKSIWEDGE--EALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEH 219
Q+ + DK++ E+ E L EVL+ +++++++T ++KI + + ++
Sbjct: 436 QVELRREEADKALDEEKRNGEDLKAEVLK--SEKMVAKTLEELEKVKIERKSLFSAKNDL 493
Query: 220 QAQNDKIKENTEKIKVNKTL 279
++Q++ +K +E +K+ K L
Sbjct: 494 ESQSESLK--SENVKLEKEL 511
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 31.9 bits (69), Expect = 0.23
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +1
Query: 76 KSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHE-HQAQNDKIKENT 252
++I +GEEAL E+ DE + T L + + S + +S Q ++D + EN
Sbjct: 775 ETICGEGEEALKEDKSPTVVDEALEDTALPEANLSDPSSPTVVVSKVLTQLKDDILAENV 834
Query: 253 EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 417
KI +P V+ L D EE+ V + I STR+ Y
Sbjct: 835 SKIPEKVAVP---EEVLTQLKDDVLEEKVSEKVAIPEEVSILSRVPINISTRRAY 886
>At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast /
transaminase A (ASP3) (YLS4) identical to SP|P46644
Aspartate aminotransferase, chloroplast precursor (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana};
identical to cDNA YLS4 mRNA for aspartate
aminotransferase (ASP3), partial cds GI:13122285
Length = 449
Score = 31.1 bits (67), Expect = 0.40
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 337 EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPDKLKPGDLVG 477
E+G + L+ RK + +I TR +LP++GLV+ +KL ++G
Sbjct: 86 EEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILG 132
>At5g46410.1 68418.m05712 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 453
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 196 VMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQ 369
V+ + A D IK +T+KI ++ +L N +V+P + E D D Q
Sbjct: 197 VLPYLEDGSANKDDIKSDTDKINLDNHDLFLAFNRTRSYNVEPDDRAESEVAEDFDPQ 254
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 30.3 bits (65), Expect = 0.70
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 313 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYF 420
D + +EEEE+ VV++ ++KGK + +ST F
Sbjct: 279 DEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEF 314
>At5g27500.1 68418.m03287 hypothetical protein hypothetical proteins
- Arabidopsis thaliana
Length = 187
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 73 DKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENT 252
D S W++ ++ + + V ++++ ++ NEI +SEV I +E A ++KE+
Sbjct: 47 DPSSWKNKKDWVEDAVYE-EVEDVLPNLGIMANEIVKARSEVNEIVNELSASIQELKEDA 105
Query: 253 --EKIKVNK 273
K+++ K
Sbjct: 106 MCSKMEIRK 114
>At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic
isozyme 1 / transaminase A (ASP2) identical to SP|P46645
Aspartate aminotransferase, cytoplasmic isozyme 1 (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana}
Length = 405
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 337 EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPDKLKPGDLVG 477
E+G + LD RK + ++ +R ++P++G+ D +KL ++G
Sbjct: 42 EEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILG 88
>At5g07220.1 68418.m00823 BAG domain-containing protein contains
Pfam:PF02179 BAG domain
Length = 303
Score = 29.1 bits (62), Expect = 1.6
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Frame = +1
Query: 43 TQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIM-KSEVMRISHEH 219
T I +E+KS+ + E L ++LR+ D II+ D ++K+M K +V R+
Sbjct: 158 TVINKGGKVEEKSL-VNLIEMLMNQLLRL--DAIIA-----DGDVKLMRKMQVQRVQKYV 209
Query: 220 QAQND-KIKENTEKIKVNKTLPYLVSNVI-----ELLDVDPQEEEE 339
+A + K+K + +K++VNK++ + +LL +EEEE
Sbjct: 210 EALDLLKVKNSAKKVEVNKSVRHKPQTQTRFEQRDLLSFVEEEEEE 255
>At1g44780.1 68414.m05130 expressed protein ; expression supported
by MPSS
Length = 471
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +1
Query: 112 EEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEK 258
EE T E T D+EI EV S EH+ ND +ENT K
Sbjct: 81 EEAGNNDTSENSQETEREDDEIPT--KEVAEQSEEHEPMNDAGEENTSK 127
>At5g06850.1 68418.m00774 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 669
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 208 SHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 339
S Q + ++ K+ V+ L YL NVIE DV+P + +
Sbjct: 68 SDASSVQGEGVQSVRSKVYVSPKLWYLRVNVIEAQDVEPSDRSQ 111
>At4g13380.1 68417.m02091 heavy-metal-associated domain-containing
protein low similarity to wound-responsive gene KED
[Nicotiana tabacum] GI:8096269; contains Pfam profile
PF00403: Heavy-metal-associated domain
Length = 195
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/65 (16%), Positives = 33/65 (50%)
Frame = +1
Query: 34 IENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISH 213
+EN ++ + +++ +W++ EE + + +++M ++ D E +I + M S
Sbjct: 113 VENKKVVITGDFDEEKLWKELEEKMRKRIVKMEKEKKDDEPITKDEENEIDRGVYMNPSS 172
Query: 214 EHQAQ 228
+ + +
Sbjct: 173 DDEKE 177
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 27.9 bits (59), Expect = 3.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 187 KSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELL-----DVDPQEEEEDGAV 351
+S S ++Q+ K K + +KV L N ++ + +PQEEEE+
Sbjct: 662 RSAAQSSSQPKESQSSK-KNKGKAVKVVDPKETLADNFMDTVRRLQSSQNPQEEEEEAIS 720
Query: 352 VDLDSQR--KGKCAVIKTSTRQT 414
D ++ R KGK V+ T + T
Sbjct: 721 KDKNTYRSDKGKSQVVGTDSSST 743
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 27.9 bits (59), Expect = 3.7
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Frame = +1
Query: 211 HEHQAQNDKIKEN--------TEKIKVNKTLPYLVSNVIELLDVDPQE-EEEDG 345
H H+ DK +EN TE + V P +VSN E DV+ E EEDG
Sbjct: 41 HRHRHHRDKKRENEIPSAGDETEILDVTPAAPIVVSNGCEEEDVEEGEILEEDG 94
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 156 KTPGQRN*NNEKRSHEDFPRTSSSKRQNKRKHGEN*SEQNTT 281
K+PG+R+ N+ S E KR NK+ N SE +++
Sbjct: 826 KSPGKRSGGNDLSSSESSGDERRRKRYNKKDRHRNDSESDSS 867
>At4g03590.1 68417.m00494 hypothetical protein
Length = 246
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 313 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPDKLKPGD 468
+ DP++EEE + S K K K T + +P + D LKP D
Sbjct: 90 EFDPEDEEESNGEKEEGSDGKAKIEEPKAKTDYYFKVPEWDVDSFDALKPTD 141
>At3g04830.2 68416.m00524 expressed protein
Length = 299
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 58 ATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRL 162
A LE K +WE+ E+A + + P D++I + ++
Sbjct: 101 ALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKV 135
>At3g04830.1 68416.m00523 expressed protein
Length = 303
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 58 ATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRL 162
A LE K +WE+ E+A + + P D++I + ++
Sbjct: 105 ALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKV 139
>At2g30500.1 68415.m03715 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 517
Score = 27.5 bits (58), Expect = 5.0
Identities = 21/103 (20%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 88 EDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQNDKIKENTEKIKV 267
EDG+EAL + + + ++ +LL + + + + H+ ++KE EK+++
Sbjct: 156 EDGDEALIRRMAELELELQETKQKLLLQQESVDGDNNVDLLHKITTYEGELKEANEKMRM 215
Query: 268 NK-TLPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAV 390
++ + L + + + D ++ + VDLD + + AV
Sbjct: 216 HEDEIANLKNQLQSFMSFDTEDHLGAEQKSVDLDKEDTKEDAV 258
>At5g46580.1 68418.m05735 pentatricopeptide (PPR) repeat-containing
protein contains similarity to 67kD chloroplastic
RNA-binding protein, P67.1 [Raphanus sativus]
GI:9755886; contains Pfam profile PF01535: PPR repeat
Length = 711
Score = 27.1 bits (57), Expect = 6.5
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = +1
Query: 106 LSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQAQ---NDKIKE-NTEKIKVNK 273
LS LR +I+S+ + + K V+ + + ++ N +IK+ +K+N
Sbjct: 72 LSATTLRQEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLNS 131
Query: 274 TLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 375
++ S + LLD P D A++ L+S R+
Sbjct: 132 SIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLRE 165
>At5g46280.1 68418.m05697 DNA replication licensing factor, putative
similar to SP|Q43704 DNA replication licensing factor
MCM3 homolog (Replication origin activator) (ROA
protein) {Zea mays}; contains Pfam profile PF00493:
MCM2/3/5 family
Length = 776
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 144 HQPYKTPGQRN*NNEKRSHEDFPRTSSSKRQNKRKHGEN*SEQNT 278
HQ R +R + RT S +R N+R++ E+ +E +T
Sbjct: 636 HQELTEMDDREQEERQREQAEQERTPSGRRGNQRRNNEDGAENDT 680
>At5g27650.1 68418.m03313 PWWP domain-containing protein
hypothetical protein F22F7.12 - Arabidopsis thaliana,
EMBL:AC009606
Length = 1072
Score = 27.1 bits (57), Expect = 6.5
Identities = 26/105 (24%), Positives = 54/105 (51%)
Frame = +1
Query: 34 IENTQITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISH 213
I++ ++T T+ D S D EA+ ++V E+ S + N+ ++++SE
Sbjct: 23 IQDPKVTPDDTVVDSS--GDVHEAIDDDVEASSPMELDSA---VTNDARVLESE------ 71
Query: 214 EHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 348
+++ D + + E+ ++ K+ L+ E +V +EEEEDG+
Sbjct: 72 --RSEKDGVVGSEEEDEI-KSEDVLIDKDDESSEVKEEEEEEDGS 113
>At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransferase,
putative similar to Swiss-Prot:P05055 polyribonucleotide
nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide
phosphorylase) (PNPase) [Escherichia coli]
Length = 991
Score = 27.1 bits (57), Expect = 6.5
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 178 KIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV- 354
K KS + E++A+ + +T K+K+ + V +V L V E G +
Sbjct: 896 KAKKSTMKENLSENKAE-ESASVSTRKLKIGTEMTATVDHVRALGLVLDLGGEIRGMYIF 954
Query: 355 --DLDSQRKGKCAVIKTSTRQTYFLPVIGLVDPD 450
D D +KG +K ++ T +PV+ LVD +
Sbjct: 955 QGDKDKFKKGDTLRVKCTSFNTKGVPVMALVDEE 988
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 169 NEIKIMKSEVMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 348
N+I IM S++ R +A D+ K EK+ ++ + ++SN + + D +EE G
Sbjct: 577 NKIIIMISDLDRRVESLEAFKDEQKAKEEKVHIDNCV--ILSNTMITRNQDEMNQEEAGD 634
Query: 349 VVDLDSQ 369
+ D +
Sbjct: 635 SREKDQE 641
>At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 144 HQPYKTPGQRN*NNEKRSHEDFPRTSSSKRQNKRKHG 254
H + P Q NNE+ H S RQ K+ HG
Sbjct: 15 HPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHG 51
>At1g60640.1 68414.m06826 expressed protein
Length = 340
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 156 KTPGQ-RN*NNEKRSHEDFPRTSSSKRQNKRKHGEN*SEQNTTLP 287
+TP Q + +R+ + R+ ++ + KHGEN N+ P
Sbjct: 205 ETPSQEKQIKGNRRARRELRRSQKQEKDSSTKHGENEEVDNSGTP 249
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 76 KSIWEDGEEALSEEVLRMPTDEIISRTRLLDN 171
K WE+ +SEEVL+ + E++ R RLLD+
Sbjct: 330 KKPWEEDAFTMSEEVLKNISLEVV-RERLLDH 360
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/78 (21%), Positives = 31/78 (39%)
Frame = +1
Query: 196 VMRISHEHQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 375
V + + + K+K E +K++K + +EL+ P E ++ S +
Sbjct: 42 VQNVDFDLEKNEIKVKGKIEVVKIHKQIEKWSKKKVELISPKPSEVKKTTTTTTTTSVVE 101
Query: 376 GKCAVIKTSTRQTYFLPV 429
K IK +T L V
Sbjct: 102 KKTTEIKKDVIRTTVLKV 119
>At3g54630.1 68416.m06044 expressed protein weak similarity to
retinoblastoma-associated protein HEC [Homo sapiens]
GI:2501873
Length = 568
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 337 EDGAVVDLDSQRKGKCAVIKTSTRQT 414
ED V DLDSQ GK KTS +T
Sbjct: 191 EDDKVNDLDSQFLGKLEAEKTSVAET 216
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 26.6 bits (56), Expect = 8.7
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +1
Query: 49 ITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHEHQ-A 225
I MATT + S++ED E+ S + T + R L D + + + ++S H
Sbjct: 796 IVMATTPVEPSLFEDLEKKYSS----VKTSTRLERKLLFDQISREVLHMLKQLSDPHPWV 851
Query: 226 QNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 339
++ K+ + K+ +TL LV+ E EE+E
Sbjct: 852 KSTKVCPKWDANKIQETLRDLVTRKDEKPSKYDVEEKE 889
>At3g48440.1 68416.m05288 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 448
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 229 NDKIKENTEKI-KVNKTLPYLVSNVIELLDVDPQEEEED 342
N+ KE +EK+ V+++ L SN + ++ + +EEEED
Sbjct: 50 NEVTKEQSEKMMSVSESNGGLDSNAVVTINQEEEEEEED 88
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 26.6 bits (56), Expect = 8.7
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Frame = +1
Query: 241 KENTEKIKVNKTLPYLVSNVIELLDV--------DPQEEEEDGAVVDLDS---QRKGKCA 387
KENTE N L S++ + LD+ D +EEEDG + + ++K K
Sbjct: 13 KENTEAESSNGNESQLSSDLTKSLDLAEVKEDEKDNNQEEEDGLKAEASTKKKKKKSKSK 72
Query: 388 VIKTSTRQT--YFLPVIGLVDPDKLKPGDL 471
K+S +QT +PV+ L G++
Sbjct: 73 KKKSSLQQTDPPSIPVLELFPSGDFPQGEI 102
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.135 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,604,691
Number of Sequences: 28952
Number of extensions: 191353
Number of successful extensions: 717
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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