Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I23
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 138 5e-33
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 132 2e-31
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 124 6e-29
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 88 7e-18
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 85 4e-17
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 29 3.2
11_06_0588 + 25272067-25274850 29 4.3
10_05_0031 + 8356046-8356361,8356439-8356648,8356735-8357043,835... 28 5.6
11_01_0218 - 1704459-1704629,1704895-1705119,1705120-1705277,170... 28 7.5
12_01_0056 + 482987-483019,483153-483362,483503-483604,484601-48... 27 9.9
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 27 9.9
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 138 bits (333), Expect = 5e-33
Identities = 63/109 (57%), Positives = 79/109 (72%)
Frame = +3
Query: 228 GVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAG 407
G+EIWRI+NF+PV + + +GKF+ GDSYIILKTT+ K +L DIHYWIG +TSQDE+G
Sbjct: 51 GLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESG 110
Query: 408 AAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSG 554
AAILTV LD GG AVQ+RE G+E++ FL YF + GG SG
Sbjct: 111 TAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASG 159
Score = 45.6 bits (103), Expect = 3e-05
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +3
Query: 231 VEIWRIQNFEPVAVQSKDFGKFYKGDSYII--LKTTSDKRNNLSWDIHYWIGSETSQDEA 404
+++WRI + + + + S D KFY GD YI + DK L I W G ++ +++
Sbjct: 405 LQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL---IGSWFGKKSIEEDR 461
Query: 405 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSG 554
A L + + AVQ R G E F F S Q GG SG
Sbjct: 462 VTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKGGLSSG 510
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 132 bits (320), Expect = 2e-31
Identities = 61/110 (55%), Positives = 75/110 (68%)
Frame = +3
Query: 225 AGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEA 404
+G+E+WRI+NF+PV V + GKFY GDSYIILKTT+ K + D+HYW+G +TSQDEA
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 405 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSG 554
G AAILTV LD GG AVQ+RE G E+ L YF + GG SG
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASG 146
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +3
Query: 231 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT-TSDKRNNLSWDIHYWIGSETSQDEAG 407
+++WR+ + S D K Y GD YI T T D + I W G ++ +++
Sbjct: 409 LQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEEDRT 466
Query: 408 AAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFT--SALQYLDGGNPSG 554
+A L F A Q +A +E +Q+F +LQ GG SG
Sbjct: 467 SAISLA---SKMFQAAKFQAAQARLYEGKEPIQFFVIFQSLQVFKGGLSSG 514
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 124 bits (299), Expect = 6e-29
Identities = 57/110 (51%), Positives = 74/110 (67%)
Frame = +3
Query: 225 AGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEA 404
+G+EIWRI+ + V V + G+F+ GDSY+ILKTT+ K + DIHYW+G +TSQDEA
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 405 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSG 554
G AAI TV LD GG AVQ+RE G+E+ FL YF + +GG SG
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASG 185
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/108 (25%), Positives = 43/108 (39%)
Frame = +3
Query: 231 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGA 410
+++WR+ E + + KFY GD YI + + I W G ++ QDE
Sbjct: 453 LQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGE-ECLIGTWFGKKSVQDEKTT 511
Query: 411 AAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSG 554
A + + + AV R G E F F + L GG +G
Sbjct: 512 AISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGVSTG 558
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 87.8 bits (208), Expect = 7e-18
Identities = 41/116 (35%), Positives = 61/116 (52%)
Frame = +3
Query: 192 VHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHY 371
V AF G + G++IW I +A++ GKFY G++YIIL T K ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 372 WIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDG 539
W+G E +++ A+ + LD G VQ+RE G ES+ FL YF + + G
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/103 (24%), Positives = 44/103 (42%)
Frame = +3
Query: 231 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGA 410
+++W + N + +++ + Y GD YII + + + W G + ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 411 AAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDG 539
AA L G+ D G AV + G E F F S + + G
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKSLIIFKGG 503
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 85.4 bits (202), Expect = 4e-17
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = +3
Query: 357 WDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLD 536
+DIH+WIG ++SQDEAG AAI TV LD GG AVQHRE G+ES+ FL YF + L+
Sbjct: 67 FDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLE 126
Query: 537 GGNPSGSTT 563
GG SG T
Sbjct: 127 GGFASGFKT 135
Score = 51.6 bits (118), Expect = 5e-07
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = +3
Query: 123 IRQQSVNTQITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYK 302
++QQ V+ I S A V P G+ +E++ + A+ ++ GKFY
Sbjct: 369 LKQQGVD--IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYS 423
Query: 303 GDSYIILKT--TSDKRNNLSWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREA 476
GD YI+L T + DKR + + YWIG ++ ++ A + + G + R
Sbjct: 424 GDCYIVLYTYHSGDKRE--EFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIY 481
Query: 477 MGHESNHFLQYFTSALQYLDGGNPSG 554
G E F+ F + L GG SG
Sbjct: 482 QGKEPPQFIALF-QPMVILKGGISSG 506
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 219 RQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETS 392
++ V +WR+ EP+ V SK FG +IL+ + RN L +W TS
Sbjct: 569 QRVAVCVWRLATGEPLRVVSKRFGLGISTCHKLILEVCAAIRNLLMPRFLHWPDHPTS 626
>11_06_0588 + 25272067-25274850
Length = 927
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +3
Query: 315 IILKTTSDKRNNLSWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESN 494
I L D R+ L WD H + AG+A I+T DDK ++ S
Sbjct: 294 IFLVILHDVRDKLIWD-HIKLAFP-DDCPAGSAIIVTTDNDDKVAQTFSPYKTFNPDSSG 351
Query: 495 HFLQYFTS 518
H L +F S
Sbjct: 352 HVLNFFLS 359
>10_05_0031 +
8356046-8356361,8356439-8356648,8356735-8357043,
8357225-8357347,8357428-8357502,8357597-8357687,
8357775-8357866,8357890-8358020
Length = 448
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2
Query: 435 RGRQSRWQPLPLHPD*SRFRSSNVYPMIDCSFYPMSSLELYRNLLCRTSQSLSI 274
RG QP PLHP +R R +V ++D + S L L + Q+LSI
Sbjct: 340 RGAPVGEQPAPLHPKSTRKRKVSVKVLLDKTSKKKSDLSLQGLWIDVLDQNLSI 393
>11_01_0218 -
1704459-1704629,1704895-1705119,1705120-1705277,
1705378-1705463,1705574-1705823,1706220-1707246
Length = 638
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 360 DIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHES 491
D+H ++ S ++ + AA G FGG H +A G ++
Sbjct: 303 DLHMFVWSSSASPVSERAAAAAAGAVHVFGGGGADHGDAKGAQA 346
>12_01_0056 +
482987-483019,483153-483362,483503-483604,484601-484700,
484775-484866,484962-485738
Length = 437
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 550 DGLPPSKYCSADVKYCRKWLLSWPIASRCCTAAPPNL 440
D LPP+ S ++ CRKW L W ++ T P +
Sbjct: 364 DALPPAVQKSV-LEECRKWNLVWVGKNKVATLEPDEM 399
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = -1
Query: 646 QWVYLSHSNIPLAFNLEHTFLGTRISHDVVEPDGLPPSKYCSADVKYCRKWLLSWPIASR 467
Q YLS P + GT + D P L S A VK C ++ A
Sbjct: 202 QIAYLSQRPSPFCRAVLSQPSGTPLGTDATAPKNLSRSGNREAYVKSCSSRTRTFSSAHA 261
Query: 466 CCTAAPPNLSSRPTVK 419
T PP ++ P+ +
Sbjct: 262 HSTVVPPGTNAEPSAE 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,904,004
Number of Sequences: 37544
Number of extensions: 447917
Number of successful extensions: 1248
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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