Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I23
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 112 3e-25
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 112 3e-25
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 2e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 55 6e-08
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 48 9e-06
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 46 2e-05
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 39 0.003
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 38 0.005
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 38 0.005
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_56058| Best HMM Match : Phasin (HMM E-Value=2.7) 30 1.4
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 28 5.8
SB_46402| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 112 bits (269), Expect = 3e-25
Identities = 57/127 (44%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Frame = +3
Query: 177 RTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDK-RNNL 353
R A A+ NAG + G++IWRI+ F+ +D+G FY GDSYIIL T + + L
Sbjct: 460 REAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKESGEDEL 519
Query: 354 SWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYL 533
+D+H+WIG +++QDE G AA TV LD +QHRE G ES F YF S L L
Sbjct: 520 KYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS-LTIL 578
Query: 534 DGGNPSG 554
GG SG
Sbjct: 579 KGGVDSG 585
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 267 AVQSKDFGKFYKGDSYIILKTTSD-KRNNLSWDIHYWIGSETSQDEAGAAAILTVGLD 437
+V D+GKFY GDSYIIL T D + + L +D+H+WIG +++QDE G AA TV LD
Sbjct: 879 SVLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELD 936
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 112 bits (269), Expect = 3e-25
Identities = 57/137 (41%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Frame = +3
Query: 150 ITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT 329
++ ++ + ++ A A+ NAG + G++IWRI F+ + +G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555
Query: 330 TSDKRNN--LSWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFL 503
+K + L +D+H+WIG ++QDE G AA TV LD VQHRE M HES+ F
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615
Query: 504 QYFTSALQYLDGGNPSG 554
YF S + YL GG +G
Sbjct: 616 TYFKS-ITYLKGGAETG 631
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 216 GRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQ 395
GR V +R+ + V + G F+ GDSY+++ T +R I++W G+++
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214
Query: 396 DEAGAAAILTVGLD-DKFGGAAVQ 464
E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 54.8 bits (126), Expect = 6e-08
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +3
Query: 177 RTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT 329
+ A PA+ AG++ GV++WRI F+ +D+G FY GDSYI+L T
Sbjct: 352 KESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Frame = +3
Query: 192 VHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWD--- 362
V AF AG++ G+EIWRI+ + VA K +G FY GDSYI L ++ D
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 363 ------IHYWIGSETSQDEAGAAAILTVGL-DDKFGGAAVQH 467
I+ W GS+ S+ E + + D++ GG A H
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVH 104
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3
Query: 360 DIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTS 518
++H+W+GSE S +E AA V L K G VQ+REA G+E+ F + F S
Sbjct: 22 NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 252 NFEPVAVQSKDFGK-FYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGAAAILTV 428
N + V +++K + FY GDSY+IL DK N +H G S DE AA +
Sbjct: 662 NMKLVKMENKVIKEGFYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAI 721
Query: 429 GLDDK-FGGAAVQHREAMGHESNHF 500
+DD+ FGG A Q + E F
Sbjct: 722 AIDDEYFGGKAKQTVQVCCREKVQF 746
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 321 LKTTSDKRNNLSWDIHYWIGSETSQDEAG 407
LKT D+ + L W I+YWIG E S++E G
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEASREEQG 288
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Frame = +3
Query: 210 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIIL--------KTTSDKRNNLSWDI 365
N GV +W I + + +++ G F+ G+ Y+I + +D+++ +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273
Query: 366 --------HYWIGSETSQDEAGAAAILTVGLDDKFG 449
+W G++ + +E GAAA++ V LD++ G
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 309
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Frame = +3
Query: 210 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIIL--------KTTSDKRNNLSWDI 365
N GV +W I + + +++ G F+ G+ Y+I + +D+++ +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828
Query: 366 --------HYWIGSETSQDEAGAAAILTVGLDDKFG 449
+W G++ + +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 369 YWIGSETSQDEAGAAAILTVGLDDKFG-GAAVQHREAMGHESNHFLQY-FTSALQYLDG 539
+W G +++ +E GAAA++TV +D + G +H + + + F Y S Y DG
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECSCFFYCDG 255
>SB_56058| Best HMM Match : Phasin (HMM E-Value=2.7)
Length = 314
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 388 LVRMKRERLPS*LSASMTSSVERRYNTARLWATRVTTSYSTSHLHYNT 531
L+R+ +E L LS + + ++ +N LW+ ++S ++H H T
Sbjct: 122 LIRLGKEELRR-LSIQLVNKLDTTWNNCLLWSIPTSSSLDSAHAHLKT 168
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 369 YWIGSETSQDEAGAAAILTVGLDDKFG 449
+W G +++ +E GAAA++TV +D + G
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKG 63
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -1
Query: 643 WVYLSHSNIPLAFNLEHTFLGTRISHDVVEPDGLP 539
W ++S SN+ + H++ + + V +P+G P
Sbjct: 286 WKFISSSNLRTHIRIHHSYFTDKAGNQVTQPNGKP 320
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -1
Query: 631 SHSNIPLAFNLEHTFLGTRISHDVVEPDGLPPSKYCSADVKYCRKWLLS 485
SH+++P+ F++ +F R+S + GL + CS + R +L S
Sbjct: 309 SHASVPVIFSIMASFSSIRVSAQRILGYGLKKFQDCSVSERRIRDFLQS 357
>SB_46402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -1
Query: 634 LSHSNIPLAFNLEHTFLGTRISHDVVEPD-GLPPSKYCSADVKYCRKWLLSWPIASRCCT 458
L ++ P+A + H R+S + ++ L + SA + RKW+ S P+ T
Sbjct: 686 LLETDTPVAVHCRHVMAAKRMSDEELDAFLRLYTTPEGSASIDRVRKWVSSQPVGDYTQT 745
Query: 457 AAPP 446
PP
Sbjct: 746 PPPP 749
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,862,150
Number of Sequences: 59808
Number of extensions: 504678
Number of successful extensions: 1390
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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