Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I21
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.3  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 102 LNCGHQVWRTTDLHKFRITAET 37
           LN  H  W  TD H F  TAE+
Sbjct: 239 LNSFH--WHITDSHSFPFTAES 258


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 70  GGPPYLVPTVQRDKIYDMIKMLEFLGRDSAFL 165
           GG P ++ T  +    D+ + L+F  R S F+
Sbjct: 441 GGKPNVLSTFWQQSDLDLSRGLDFQPRGSVFV 472


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 291 SSWPGRVPAAA 323
           SSWPGR P  A
Sbjct: 35  SSWPGRPPKRA 45


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 116 TI*SRCSSSWAGIPLSWRAPELDHG 190
           TI S+  + WA  P+ W A   D G
Sbjct: 251 TIDSQWLAHWAFAPIRWVAKLWDSG 275


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 347 LRYLETIS*VKANPEKL 397
           L ++ TI+ +KA+PEK+
Sbjct: 504 LGHILTINGIKADPEKI 520


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 216 TLAIDSEVWPWSSSGA 169
           ++++DS V  W S GA
Sbjct: 222 SMSVDSSVQSWLSGGA 237


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 74  PPISTSFASPLRPH 33
           PPI++   S LRPH
Sbjct: 155 PPITSFETSGLRPH 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,289
Number of Sequences: 336
Number of extensions: 3820
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)