Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I21
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical pr...   105   2e-23
AL132898-7|CAC14410.1|  413|Caenorhabditis elegans Hypothetical ...    30   1.4  
U00052-4|AAK21419.2|  438|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical ...    28   4.1  
Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.      28   5.5  

>U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical
           protein C24B5.4 protein.
          Length = 284

 Score =  105 bits (252), Expect = 2e-23
 Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = +1

Query: 37  GLSGDAKLVEIGGPPYLVPTVQRDKIYDMIKMLEFLGRDSAFLAGAGAGPWPYLGVNCEG 216
           G   + ++ E+GGP  L P    D  +D+ K+ +      A + G GAGPWP +G NCE 
Sbjct: 34  GFGHNLRIAEVGGPGNLYPGFHIDHQFDIPKIGKVCEHPEAAVFGPGAGPWPIVGQNCEM 93

Query: 217 IINLSVRNGTVDQGTRIVSINPVGAPHGQGGYLQQRLPNNETRTALLGNYLLSEG-KPGK 393
           + +++++ G V  GTRI  IN     +    Y+Q+ +  +E + +L+ N  LS+  K   
Sbjct: 94  VADVNLKTGEV--GTRIAEIN----SNSDKRYVQRII--DEPKFSLMANLALSDADKSST 145

Query: 394 VIKVVAKKRIGGSNFITAIRETLKNHYQDQVLGLGGMFLLRSGRVKFHVMPDF 552
           V+   A  R G  N    IR+ L+ H+  +++ L G F++++G+ + HVMPDF
Sbjct: 146 VVHFKASVRKGEKNLTNCIRDGLQEHFGKKIVSLAGQFIIQTGKARLHVMPDF 198


>AL132898-7|CAC14410.1|  413|Caenorhabditis elegans Hypothetical
           protein Y59A8B.10 protein.
          Length = 413

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +1

Query: 265 IVSINPVGAPHGQGGYLQQRLPN-NETRTALLGNYLLSEGKPGKVIKVVAKKRIGGSNFI 441
           ++  N VGA  G+GG   + L N N  R  +  N   SE  PG   ++   K  G  N I
Sbjct: 47  LIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKN---SETYPGTSERICLVK--GRLNNI 101

Query: 442 TAIRETLKNHYQDQVLGLGG 501
            A+ E++++  +++    GG
Sbjct: 102 MAVIESIQDKIREKCADQGG 121


>U00052-4|AAK21419.2|  438|Caenorhabditis elegans Hypothetical
           protein K02F3.7 protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +3

Query: 216 YNKSERAQRHRGPGYS--YRLHKPSGCSSWPGRVPAAASAQQRDQDCVTW 359
           Y+K+E+ +   GP  S  ++L  PSG  + P + PA+A   +RD D V W
Sbjct: 189 YSKAEKGKVLEGPKTSTTFQLLAPSG-ETLPYK-PASARRFKRDSDMVFW 236


>AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical
           protein Y68A4A.10a protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +1

Query: 115 YDMIKMLEFLGRDSAFLAGAGAGPWPYLGVNCEGIINLSVRNGTVDQGTRIVSIN 279
           YD + +LE  G +  F +G G GP     V C   + L   NG +   T I SI+
Sbjct: 300 YDALLILEMTGGE-LFTSGTGPGPIAETSVTCGDDVILQDPNG-IRGNTLIASIS 352


>Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical
           protein D2045.1a protein.
          Length = 959

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +3

Query: 87  GAHSSAR*DLRYDQDARVPGQGFRFLGGRRSWTMAIPRSQLRGYNKSERAQRHR--GPGY 260
           GA ++A+ +   +Q  +   +G+R       W MA  + Q +G++ S R Q+ +   P  
Sbjct: 293 GAPAAAQQNYSQNQQQQQGQKGYRRQNEENDWQMAKGKGQNQGHDHSFRQQQKQMLDPRP 352

Query: 261 SYRLHKPSGCSSWPGRVPAAASAQQRDQDCVTW 359
           +  + KP+   +       AA+   R  D   W
Sbjct: 353 NNNV-KPADDKAQSATTATAAAGGSRVTDLKNW 384


>AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.
          Length = 959

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +3

Query: 87  GAHSSAR*DLRYDQDARVPGQGFRFLGGRRSWTMAIPRSQLRGYNKSERAQRHR--GPGY 260
           GA ++A+ +   +Q  +   +G+R       W MA  + Q +G++ S R Q+ +   P  
Sbjct: 293 GAPAAAQQNYSQNQQQQQGQKGYRRQNEENDWQMAKGKGQNQGHDHSFRQQQKQMLDPRP 352

Query: 261 SYRLHKPSGCSSWPGRVPAAASAQQRDQDCVTW 359
           +  + KP+   +       AA+   R  D   W
Sbjct: 353 NNNV-KPADDKAQSATTATAAAGGSRVTDLKNW 384


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,252,879
Number of Sequences: 27780
Number of extensions: 367589
Number of successful extensions: 867
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)