Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I20
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.3  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 348 QRKSVSDFADQSHATLPPPHRSPKGGF 268
           +R+ V    DQS+  +  PH  P G +
Sbjct: 389 RRRIVQPMIDQSNRAVFSPHAGPSGAY 415


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 197 VFVFYCFIIIISLDVQFC 250
           ++ FYC +II+     FC
Sbjct: 285 IYYFYCALIILLCIYYFC 302



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 197 VFVFYCFIIIISLDVQFC 250
           ++ F+C  II ++ + FC
Sbjct: 166 IYHFFCAFIIFTMHLLFC 183


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 165 LNKYVNSCVLMYLCFIVLLL 224
           +N+YV +  ++Y+C   +L+
Sbjct: 168 VNEYVQAIEVLYICSYTVLI 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,905
Number of Sequences: 336
Number of extensions: 2472
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)