Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I20
         (617 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens ...    31   3.3  
AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens ...    31   3.3  
BC027448-1|AAH27448.1|   85|Homo sapiens Unknown (protein for MG...    30   5.7  
AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens ...    30   7.5  
AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens ...    30   7.5  

>AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45698 fis, clone FEBRA2017811. ).
          Length = 415

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -2

Query: 262 VHLHTKLYI*TDNNNKTIKHKYI--KTQLFTYLFK-LDI*LPTHARSHTHTH 116
           +H HT ++I +D +     H     +TQ+ T     + I +PTH R++TH H
Sbjct: 155 MHTHTCIHIHSDTHLHIYTHTLTCTQTQIHTCTHTHIHIHMPTHTRTYTHMH 206



 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 259 HLHTKLYI*TDNNNKTIKHKYIKTQLFTYLFK-LDI*LPTHARSHTHTH 116
           H H  +Y+ T  +  T  H Y     +TY      I + TH  +H HT+
Sbjct: 350 HTHIHIYVYTHTHMHTPTHIYAHRHTYTYAHSHTYIHMHTHIHTHIHTY 398


>AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41637 fis, clone FEBRA1000030, weakly  similar
           to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
          Length = 207

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -2

Query: 244 LYI*TDNNNKTIKHK--YIKTQLFTYLFKLDI*LPTHARSHTHTH 116
           LYI T  +  T  H   Y+ T   T+       LP H  +HTHTH
Sbjct: 73  LYIHTHTHTHTHTHAVLYLPTHTHTHAVLTLAYLPIHTHTHTHTH 117


>BC027448-1|AAH27448.1|   85|Homo sapiens Unknown (protein for
           MGC:34919) protein.
          Length = 85

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -2

Query: 256 LHTKLYI*TDNNNKTIKHKYIKTQLFTYLFKLDI*LPTHARSHTHTH 116
           LHT+  +    +  TI   YI T  +T+ + + +   TH  +HTHTH
Sbjct: 24  LHTQYTVCIYTHTHTILCMYIYTHTYTHDYIVYV--YTHTHTHTHTH 68


>AK096940-1|BAC04906.1|  226|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39621 fis, clone SMINT2001158. ).
          Length = 226

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 262 VHLHTKLYI*TDNNNKTIKHKYIKTQLFTYLFKLDI*LPTHARSHTHTH 116
           +H H   +I T  +  T+ H    T L T++        THA  H+HTH
Sbjct: 52  IHTHPHTHISTHTHPLTVTH-ITHTHLLTHIHSHSF---THAHMHSHTH 96


>AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38312 fis, clone FCBBF3021506. ).
          Length = 134

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 174 YVNSCVLMYLCFIVLLLLSV*MYSFVCKC 260
           YV  CV +Y+C  V + + V +  FVC C
Sbjct: 61  YVCICVCLYVCVFVCVCMYVYLCVFVCMC 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,500,809
Number of Sequences: 237096
Number of extensions: 1348587
Number of successful extensions: 2590
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2577
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)