Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I20
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   7.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.6  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 222 IIKQ*NTNTSKRNYLHIYSNWISNY 148
           II   N+ ++  NY + Y+N+ +NY
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYNNNY 105


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 578 FISFTLRWLCVLW 616
           FI FT+   C++W
Sbjct: 707 FIGFTMYTTCIIW 719


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 578 FISFTLRWLCVLW 616
           FI FT+   C++W
Sbjct: 797 FIGFTMYTTCIIW 809


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 292 PSLSQGGVQTVHLHTKLY 239
           P L  GGV+  H H + Y
Sbjct: 11  PDLRNGGVEHPHQHQQHY 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,061
Number of Sequences: 438
Number of extensions: 3126
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)