Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I19
         (381 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130428-1|AAI30429.1|  541|Homo sapiens chromodomain protein, Y...    29   5.0  
BC130426-1|AAI30427.1|  541|Homo sapiens chromodomain protein, Y...    29   5.0  
BC069087-1|AAH69087.1|  541|Homo sapiens chromodomain protein, Y...    29   5.0  
AF080598-1|AAD22733.1|  541|Homo sapiens testis-specific chromod...    29   5.0  
BC132955-1|AAI32956.1|  554|Homo sapiens chromodomain protein, Y...    29   6.6  
BC132929-1|AAI32930.1|  554|Homo sapiens chromodomain protein, Y...    29   6.6  
AF080597-1|AAD22732.1|  540|Homo sapiens testis-specific chromod...    29   6.6  
AF000981-1|AAC52116.1|  554|Homo sapiens testis-specific ChromoD...    29   6.6  

>BC130428-1|AAI30429.1|  541|Homo sapiens chromodomain protein,
           Y-linked, 2B protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 351


>BC130426-1|AAI30427.1|  541|Homo sapiens chromodomain protein,
           Y-linked, 2B protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 351


>BC069087-1|AAH69087.1|  541|Homo sapiens chromodomain protein,
           Y-linked, 2B protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 351


>AF080598-1|AAD22733.1|  541|Homo sapiens testis-specific
           chromodomain protein Y isoform 2 protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 351


>BC132955-1|AAI32956.1|  554|Homo sapiens chromodomain protein,
           Y-linked, 1 protein.
          Length = 554

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 350


>BC132929-1|AAI32930.1|  554|Homo sapiens chromodomain protein,
           Y-linked, 1B protein.
          Length = 554

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 350


>AF080597-1|AAD22732.1|  540|Homo sapiens testis-specific
           chromodomain protein Y isoform 1 protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 350


>AF000981-1|AAC52116.1|  554|Homo sapiens testis-specific
           ChromoDomain Y isoform 1 protein.
          Length = 554

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 70  SELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDFGYY 222
           S  + +  A+++ V K     L       SK  +F+    +F C +DFGY+
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYF 350


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,241,699
Number of Sequences: 237096
Number of extensions: 631932
Number of successful extensions: 4508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4508
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)