Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I19
         (381 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-2|CAA84735.2|  335|Caenorhabditis elegans Hypothetical pr...    28   2.0  
U58727-3|AAB00583.1|  131|Caenorhabditis elegans Hypothetical pr...    28   2.0  
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    28   2.0  
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    28   2.0  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    27   6.0  
AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical ...    27   6.0  

>Z35663-2|CAA84735.2|  335|Caenorhabditis elegans Hypothetical
           protein T04A8.2 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = +1

Query: 16  IFLLIVTVSLFLSLPVKSSELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIF 195
           +F ++ T  +F +L +    L    + +S   A  S  F+ + + Q     +F  +S IF
Sbjct: 212 LFTIVCTSVIFYTLVMLPKRLRNVERTLSLGTAYISMSFIILVVFQ----FLFAFYSDIF 267

Query: 196 TCSVDFGY 219
           T S  FGY
Sbjct: 268 TTSTIFGY 275


>U58727-3|AAB00583.1|  131|Caenorhabditis elegans Hypothetical
           protein D1005.6 protein.
          Length = 131

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 194 NILLKVVKILHFDFWFKFI*RNLAENLATADEIALASMVNSELF 63
           N  +K  K+ +F F+F F     +ENL  + E    +MVN  L+
Sbjct: 71  NFCIKKKKMQNFQFFFNFKCFEKSENLEMSAEGRTVTMVNGALY 114


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +2

Query: 125 LSFFK*T*TKSQNVVSSPLSAEYXXXXXXXXXXDPAHEELL-TSLDIPNDDCIRSSFTSI 301
           L+F       ++++V SPLS               + +++  T L    D+ +   F+ +
Sbjct: 11  LNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFV 70

Query: 302 TSNLKS-IXGITLNIAXKVYLKEG 370
           +  +K+   G+ + +A KVYLK+G
Sbjct: 71  SKEVKNGTKGVEVYLANKVYLKKG 94


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +2

Query: 125 LSFFK*T*TKSQNVVSSPLSAEYXXXXXXXXXXDPAHEELL-TSLDIPNDDCIRSSFTSI 301
           L+F       ++++V SPLS               + +++  T L    D+ +   F+ +
Sbjct: 11  LNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFV 70

Query: 302 TSNLKS-IXGITLNIAXKVYLKEG 370
           +  +K+   G+ + +A KVYLK+G
Sbjct: 71  SKEVKNGTKGVEVYLANKVYLKKG 94


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
            F40E10.4 protein.
          Length = 1410

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +1

Query: 34   TVSLFLSLPVKSSELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDF 213
            TVS  L L  +  + T D+K  +    K     L +N   K+     TT SR +TC+   
Sbjct: 842  TVSNQLLLTAQPYQFTCDSKVPTKLATKCD---LCLNSPCKNNAICETTSSRKYTCNCTP 898

Query: 214  GYY 222
            G+Y
Sbjct: 899  GFY 901


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
            protein F40E10.4 protein.
          Length = 1410

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +1

Query: 34   TVSLFLSLPVKSSELTMDAKAISSAVAKFSAKFL*MNLNQKSKCSIFTTFSRIFTCSVDF 213
            TVS  L L  +  + T D+K  +    K     L +N   K+     TT SR +TC+   
Sbjct: 842  TVSNQLLLTAQPYQFTCDSKVPTKLATKCD---LCLNSPCKNNAICETTSSRKYTCNCTP 898

Query: 214  GYY 222
            G+Y
Sbjct: 899  GFY 901


>AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical
           protein W05E7.2 protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +1

Query: 7   VEDIFLLIVTVSLFLSLPVKSSELTMDAKAISSAVAKFSA-KFL*MNLNQKSKCSIFTTF 183
           V ++ L++V   +   + ++ S L  + + +++ +  F   KF+ + L+QK   +++TT 
Sbjct: 269 VSELILILVVDVIITPVIIQISYLGCNKRNLNTLLNAFELRKFVRVILDQKESSTVYTTT 328

Query: 184 SRIF 195
           + +F
Sbjct: 329 NHMF 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,284,104
Number of Sequences: 27780
Number of extensions: 115351
Number of successful extensions: 223
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)