Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I18
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001940-1|AAH01940.2|  748|Homo sapiens hypothetical protein DK...    31   3.7  
AK074809-1|BAC11221.1|  748|Homo sapiens protein ( Homo sapiens ...    31   3.7  
AB162218-1|BAD36741.1|  748|Homo sapiens hFLEG1 protein.               31   3.7  

>BC001940-1|AAH01940.2|  748|Homo sapiens hypothetical protein
           DKFZp762E1312 protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 312 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 220
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AK074809-1|BAC11221.1|  748|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90328 fis, clone NT2RP2001921. ).
          Length = 748

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 312 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 220
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AB162218-1|BAD36741.1|  748|Homo sapiens hFLEG1 protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 312 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 220
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,562,325
Number of Sequences: 237096
Number of extensions: 2137681
Number of successful extensions: 4425
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4425
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)