Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I17
         (554 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   2.2  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   2.9  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   2.9  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   2.9  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   2.9  

>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -1

Query: 413 PTSWQYAARSKTSASGAPPTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTRTD 234
           PT+W     + T +   PP  T   +     T T +      + T SD+  P  PPT T 
Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTTTTWSDL--PPPPPTTTT 219

Query: 233 LI 228
            +
Sbjct: 220 TV 221


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -1

Query: 413 PTSWQYAARSKTSASGAPPTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTRTD 234
           PT+W     + T +   PP  T   +     T T +      + T SD+  P  PPT T 
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDL--PPPPPTTTT 218

Query: 233 LI 228
            +
Sbjct: 219 TV 220


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -1

Query: 413 PTSWQYAARSKTSASGAPPTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTRTD 234
           PT+W     + T +   PP  T   +     T T +      + T SD+  P  PPT T 
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDL--PPPPPTTTT 218

Query: 233 LI 228
            +
Sbjct: 219 TV 220


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 387 SCSILPGC-RRRFIVDTS*AVFQTGNSG 467
           SCS LPGC    ++ D + A  Q G  G
Sbjct: 420 SCSCLPGCFEISYVPDLTTAELQVGRFG 447


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 387 SCSILPGC-RRRFIVDTS*AVFQTGNSG 467
           SCS LPGC    ++ D + A  Q G  G
Sbjct: 420 SCSCLPGCFEISYVPDLTTAELQVGRFG 447


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,919
Number of Sequences: 2352
Number of extensions: 11726
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)