Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I17
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    31   1.4  
BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p pro...    30   2.4  
AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-P...    30   2.4  

>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
           protein.
          Length = 881

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 416 TPTSWQYAARSKTSASGAP-PTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTR 240
           TPT+      + T+ +    PT T  C+P    T T +  T   + T +  C+P    T 
Sbjct: 491 TPTTTTTTTTTTTTTTTTTTPTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTT 550

Query: 239 T 237
           T
Sbjct: 551 T 551



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/61 (24%), Positives = 25/61 (40%)
 Frame = -1

Query: 419 STPTSWQYAARSKTSASGAPPTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTR 240
           +T T+      + T+ +    T T  C+P    T T +  T   + T +  C+P    T 
Sbjct: 409 TTTTTSTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTT 468

Query: 239 T 237
           T
Sbjct: 469 T 469



 Score = 27.9 bits (59), Expect = 9.7
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 416 TPTSWQYAARSKTSASGAPPTCT*ICSPVVLDTLTHSVITFFLSDTASDICSPVVPPTRT 237
           TP S    + + T AS    T T  C+P    T + +  T   + T +  C+P    T T
Sbjct: 123 TPCSGIITSTTTTPASTTTTTTT--CTPTTTTTTSTTTTTTTTTTTTTTTCTPTTTTTTT 180


>BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p
           protein.
          Length = 155

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
 Frame = +1

Query: 253 TTGEHMSLAVSDRKKVITEWVK-VSKTTGLHIQVQVGGAPLADVLDLAAYCQDVGVDSLL 429
           T   H SL       V+ + V  V KTT +H    +  AP+   L   AY   +   + +
Sbjct: 54  TAVSHQSLTQVHSTPVVEDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPV 113

Query: 430 TLPELYFKPATVAELVSYVELVANAAP 510
                Y  P T +  V+Y   ++ AAP
Sbjct: 114 AYSS-YAAPLTYSAPVAYSAPLSYAAP 139


>AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-PA
           protein.
          Length = 155

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
 Frame = +1

Query: 253 TTGEHMSLAVSDRKKVITEWVK-VSKTTGLHIQVQVGGAPLADVLDLAAYCQDVGVDSLL 429
           T   H SL       V+ + V  V KTT +H    +  AP+   L   AY   +   + +
Sbjct: 54  TAVSHQSLTQVHSTPVVEDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPV 113

Query: 430 TLPELYFKPATVAELVSYVELVANAAP 510
                Y  P T +  V+Y   ++ AAP
Sbjct: 114 AYSS-YAAPLTYSAPVAYSAPLSYAAP 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,117,417
Number of Sequences: 53049
Number of extensions: 560317
Number of successful extensions: 1325
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)