Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I17
         (554 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical pr...    32   0.24 
Z79605-2|CAB01903.1|  342|Caenorhabditis elegans Hypothetical pr...    28   3.9  
U97196-4|AAP68962.2|  408|Caenorhabditis elegans G protein, alph...    27   6.9  
AC024827-1|AAF60806.2|  581|Caenorhabditis elegans Hypothetical ...    27   6.9  
U97196-5|AAB52458.3|  368|Caenorhabditis elegans G protein, alph...    27   9.1  
U40420-2|AAK84526.3|  245|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AY008136-1|AAG32089.1|  368|Caenorhabditis elegans heterotrimeri...    27   9.1  
AL132952-10|CAB63384.1|  591|Caenorhabditis elegans Hypothetical...    27   9.1  
AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF125445-1|AAD12803.2|  550|Caenorhabditis elegans Hypothetical ...    27   9.1  
AC084155-1|AAG23361.2|  352|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical
           protein B0393.3 protein.
          Length = 621

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 208 KFLADNGIKSVLVGGTTGEHMSLAVSDRKKVITEWVKVSKTTGLHIQVQVGGAPLADV-L 384
           KFL D    S    G++ EH+SL+    K + +  +   KT      + + G    D+  
Sbjct: 280 KFLGDLSDLSTSPAGSSIEHLSLSFC--KNIGSNGISKLKTLPNLKSLNLDGVSKRDIST 337

Query: 385 DLAAYCQDVGVDSLLTLPELYFKPATVAELVSYVE 489
            L A  Q   ++ LL   + Y  P T+AE V+  E
Sbjct: 338 GLEAIGQAGRLERLLVSEDTYVNPKTIAEFVNTCE 372


>Z79605-2|CAB01903.1|  342|Caenorhabditis elegans Hypothetical
           protein ZK678.2 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 17  TKEIYLLIYLRNSCNTTCLTFVYFGRVLLTT 109
           TKE YLL+ +  +CN T +    +G+ +L T
Sbjct: 243 TKEEYLLMAVLFACNPTDINISLYGKTILNT 273


>U97196-4|AAP68962.2|  408|Caenorhabditis elegans G protein, alpha
           subunit protein14, isoform b protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
 Frame = +1

Query: 274 LAVSDRKKVITEWVKVSKTTGLHIQVQVGGAPLADVLDLAAYCQDVGVDSLLTLPELYFK 453
           LA     ++  E     KT G HI++ + G PL+    +    Q + VD   T  EL   
Sbjct: 50  LARRGHMEIEKELALEKKTYGSHIKILILGGPLSGKSTIFKQMQIIHVDGFKTDQELIQY 109

Query: 454 PATVAELVS--YVELVANA-APEITSSLLSHTQYE 549
              +   +   Y++L+A +    I    + H  YE
Sbjct: 110 RGLIDNNIRDIYLQLIAGSRVVGIPLDPIEHITYE 144


>AC024827-1|AAF60806.2|  581|Caenorhabditis elegans Hypothetical
           protein Y55F3AR.3 protein.
          Length = 581

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +1

Query: 208 KFLADNGIKSVLVGGTTGEHMSLAVSDRKKVITEWVKVSKTTGLHIQVQVGGAPLADV-- 381
           K +ADNG+K V+  G  G+ M L   ++ K++   +  SK     +   VG  P A +  
Sbjct: 314 KAIADNGVKVVVAAGKFGD-MYLHFLNKYKIMAVRL-TSKFDLRRLCRTVGAQPQARICA 371

Query: 382 --LDLAAYCQDVGVDSL 426
             ++L  +C  V V  +
Sbjct: 372 PAVNLLGHCDSVAVQEI 388


>U97196-5|AAB52458.3|  368|Caenorhabditis elegans G protein, alpha
           subunit protein14, isoform a protein.
          Length = 368

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +1

Query: 325 KTTGLHIQVQVGGAPLADVLDLAAYCQDVGVDSLLTLPELYFKPATVAELVS--YVELVA 498
           KT G HI++ + G PL+    +    Q + VD   T  EL      +   +   Y++L+A
Sbjct: 27  KTYGSHIKILILGGPLSGKSTIFKQMQIIHVDGFKTDQELIQYRGLIDNNIRDIYLQLIA 86

Query: 499 NA-APEITSSLLSHTQYE 549
            +    I    + H  YE
Sbjct: 87  GSRVVGIPLDPIEHITYE 104


>U40420-2|AAK84526.3|  245|Caenorhabditis elegans Hypothetical
           protein F40F4.7 protein.
          Length = 245

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -3

Query: 513 FGCSISDQFYVGDQFSHCCRFEIQLRKCQQ*IDAYILAVCCKIQDIG*RRSPYL 352
           F  + +D+FYV  ++   C    +L +     D  + AVCC+I DI   +S YL
Sbjct: 117 FPIAYNDKFYVEARY---CG---ELGRLAYYNDVVVGAVCCRIDDISDEKSLYL 164


>AY008136-1|AAG32089.1|  368|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 368

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +1

Query: 325 KTTGLHIQVQVGGAPLADVLDLAAYCQDVGVDSLLTLPELYFKPATVAELVS--YVELVA 498
           KT G HI++ + G PL+    +    Q + VD   T  EL      +   +   Y++L+A
Sbjct: 27  KTYGSHIKILILGGPLSGKSTIFKQMQIIHVDGFKTDQELIQYRGLIDNNIRDIYLQLIA 86

Query: 499 NA-APEITSSLLSHTQYE 549
            +    I    + H  YE
Sbjct: 87  GSRVVGIPLDPIEHITYE 104


>AL132952-10|CAB63384.1|  591|Caenorhabditis elegans Hypothetical
           protein Y51H4A.13 protein.
          Length = 591

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 397 MLQDPRHRLAALPLLVPEYVVPWS 326
           +L D RH L  L LLVPE VV W+
Sbjct: 209 LLSDQRHWLEKLALLVPEKVV-WT 231


>AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical
           protein Y105C5A.15 protein.
          Length = 737

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 148 VFTPLNDDLSVNYGAIPSYAKFLADNG 228
           + +PL DDL VN+G++P   +     G
Sbjct: 65  IASPLLDDLKVNFGSVPKIEQMDCSGG 91


>AF125445-1|AAD12803.2|  550|Caenorhabditis elegans Hypothetical
           protein Y24D9B.1 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 397 MLQDPRHRLAALPLLVPEYVVPWS 326
           +L D RH L  L LLVPE VV W+
Sbjct: 209 LLSDQRHWLEKLALLVPEKVV-WT 231


>AC084155-1|AAG23361.2|  352|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.6 protein.
          Length = 352

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 120 NDHIVVNNTRPKYTKVKQ 67
           ND IV+N TR KYT+  Q
Sbjct: 98  NDRIVMNTTRQKYTRTIQ 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,284,737
Number of Sequences: 27780
Number of extensions: 282175
Number of successful extensions: 740
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)