Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I16
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.6  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 327 LIDVLLWHRADVPIQC*RFVEPSG 256
           ++ +  W  +D+  +C RF+ P G
Sbjct: 29  IVHLFEWKWSDIADECERFLAPKG 52


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 327 LIDVLLWHRADVPIQC*RFVEPSG 256
           ++ +  W  +D+  +C RF+ P G
Sbjct: 30  IVHLFEWKWSDIADECERFLAPKG 53


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 1    FNFLDRLFSSGSISPILEDPKSTFAMDVLKYLQLELRGGKNIYKLLDSINVLCQL 165
            + F     + G+I+P  E PK      +L  L L +     +  ++ +I V+C L
Sbjct: 1577 YEFATLTVTGGTIAPAREIPKEDTFQIILANLNLVVPVVAAVLVIIVAIIVICVL 1631


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 327 LIDVLLWHRADVPIQC*RFVEPSG 256
           ++ +  W  +D+   C RF+ P G
Sbjct: 30  IVHLFEWKWSDIADVCERFLAPKG 53


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 388 LSASNLIRHAPN 353
           +SASNLI+  PN
Sbjct: 311 MSASNLIQRTPN 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,952
Number of Sequences: 336
Number of extensions: 2873
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)