Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I16
         (632 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07)                   29   3.1  
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)               27   9.6  

>SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07)
          Length = 336

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -1

Query: 479 WKLLNTNAFQGGDF--SFNNGLLIFMRSHN 396
           W+++N   ++GG F  S NNG+L+F RS N
Sbjct: 97  WRMVNPR-WRGGRFENSENNGILLFKRSEN 125


>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3259

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 235 RYVRRCAAARLYEALTLYGDVCSVPQQN 318
           R + RC+ AR+ E +  + DV SVP+ N
Sbjct: 634 RTIFRCSQARMEEGMLTFDDVTSVPKVN 661


>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
          Length = 1829

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 103 ELRGGKNIYK--LLDSINVLCQLIQVGGIVCSKSLGQLVIYLCYADRYVRRC 252
           ELRG    YK  +  SIN + QL+   G + S+ L Q        DRY  +C
Sbjct: 372 ELRGSMTAYKGHITRSINQVDQLLTQNGSLTSEVLRQKSRLEKLCDRYKGKC 423


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,789,337
Number of Sequences: 59808
Number of extensions: 350229
Number of successful extensions: 668
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)