Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I16
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein. 88 2e-17
BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein. 88 3e-17
BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofacto... 88 3e-17
AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein pr... 88 3e-17
AF193042-1|AAG22470.1| 184|Homo sapiens unknown protein. 88 3e-17
AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein. 88 3e-17
AJ006417-1|CAA07022.1| 1248|Homo sapiens beta-tubulin cofactor D... 65 2e-10
>BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein.
Length = 387
Score = 88.2 bits (209), Expect = 2e-17
Identities = 43/136 (31%), Positives = 78/136 (57%)
Frame = +1
Query: 10 LDRLFSSGSISPILEDPKSTFAMDVLKYLQLELRGGKNIYKLLDSINVLCQLIQVGGIVC 189
LD + + G + F++ +L + E++ K+I KLL I V C+++Q G V
Sbjct: 242 LDHVLTHGCFDIFTTEEDHPFSVKLLALCKKEIKNSKDIQKLLSGIAVFCEMVQFPGDVR 301
Query: 190 SKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQQNIDQIITVLAEIDWERDV 369
++L QL + LC+ +R+ A+++YE L Y DV V +D+++TVL++ W+ ++
Sbjct: 302 RQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDV--VGADVLDEVVTVLSDTAWDAEL 359
Query: 370 SDLRPIRNELCDLMNI 417
+ +R RN LCDL+ +
Sbjct: 360 AVVREQRNRLCDLLGV 375
>BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein.
Length = 623
Score = 87.8 bits (208), Expect = 3e-17
Identities = 44/136 (32%), Positives = 77/136 (56%)
Frame = +1
Query: 10 LDRLFSSGSISPILEDPKSTFAMDVLKYLQLELRGGKNIYKLLDSINVLCQLIQVGGIVC 189
LD + + G + FA+ +L + E++ K+I KLL I V C ++Q G V
Sbjct: 478 LDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCGMVQFPGDVR 537
Query: 190 SKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQQNIDQIITVLAEIDWERDV 369
++L QL + LC+ +R+ A+++YE L Y DV V +D+++TVL++ W+ ++
Sbjct: 538 RQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDV--VGADVLDEVVTVLSDTAWDAEL 595
Query: 370 SDLRPIRNELCDLMNI 417
+ +R RN LCDL+ +
Sbjct: 596 AVVREQRNRLCDLLGV 611
>BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofactor D
protein.
Length = 1192
Score = 87.8 bits (208), Expect = 3e-17
Identities = 44/136 (32%), Positives = 77/136 (56%)
Frame = +1
Query: 10 LDRLFSSGSISPILEDPKSTFAMDVLKYLQLELRGGKNIYKLLDSINVLCQLIQVGGIVC 189
LD + + G + FA+ +L + E++ K+I KLL I V C ++Q G V
Sbjct: 1047 LDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCGMVQFPGDVR 1106
Query: 190 SKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQQNIDQIITVLAEIDWERDV 369
++L QL + LC+ +R+ A+++YE L Y DV V +D+++TVL++ W+ ++
Sbjct: 1107 RQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDV--VGADVLDEVVTVLSDTAWDAEL 1164
Query: 370 SDLRPIRNELCDLMNI 417
+ +R RN LCDL+ +
Sbjct: 1165 AVVREQRNRLCDLLGV 1180
>AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein
protein.
Length = 1050
Score = 87.8 bits (208), Expect = 3e-17
Identities = 44/136 (32%), Positives = 77/136 (56%)
Frame = +1
Query: 10 LDRLFSSGSISPILEDPKSTFAMDVLKYLQLELRGGKNIYKLLDSINVLCQLIQVGGIVC 189
LD + + G + FA+ +L + E++ K+I KLL I V C ++Q G V
Sbjct: 905 LDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCGMVQFPGDVR 964
Query: 190 SKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQQNIDQIITVLAEIDWERDV 369
++L QL + LC+ +R+ A+++YE L Y DV V +D+++TVL++ W+ ++
Sbjct: 965 RQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDV--VGADVLDEVVTVLSDTAWDAEL 1022
Query: 370 SDLRPIRNELCDLMNI 417
+ +R RN LCDL+ +
Sbjct: 1023 AVVREQRNRLCDLLGV 1038
>AF193042-1|AAG22470.1| 184|Homo sapiens unknown protein.
Length = 184
Score = 87.8 bits (208), Expect = 3e-17
Identities = 44/136 (32%), Positives = 77/136 (56%)
Frame = +1
Query: 10 LDRLFSSGSISPILEDPKSTFAMDVLKYLQLELRGGKNIYKLLDSINVLCQLIQVGGIVC 189
LD + + G + FA+ +L + E++ K+I KLL I V C ++Q G V
Sbjct: 39 LDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCGMVQFPGDVR 98
Query: 190 SKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQQNIDQIITVLAEIDWERDV 369
++L QL + LC+ +R+ A+++YE L Y DV V +D+++TVL++ W+ ++
Sbjct: 99 RQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDV--VGADVLDEVVTVLSDTAWDAEL 156
Query: 370 SDLRPIRNELCDLMNI 417
+ +R RN LCDL+ +
Sbjct: 157 AVVREQRNRLCDLLGV 172
>AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein.
Length = 1210
Score = 87.8 bits (208), Expect = 3e-17
Identities = 44/136 (32%), Positives = 77/136 (56%)
Frame = +1
Query: 10 LDRLFSSGSISPILEDPKSTFAMDVLKYLQLELRGGKNIYKLLDSINVLCQLIQVGGIVC 189
LD + + G + FA+ +L + E++ K+I KLL I V C ++Q G V
Sbjct: 1065 LDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCGMVQFPGDVR 1124
Query: 190 SKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQQNIDQIITVLAEIDWERDV 369
++L QL + LC+ +R+ A+++YE L Y DV V +D+++TVL++ W+ ++
Sbjct: 1125 RQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDV--VGADVLDEVVTVLSDTAWDAEL 1182
Query: 370 SDLRPIRNELCDLMNI 417
+ +R RN LCDL+ +
Sbjct: 1183 AVVREQRNRLCDLLGV 1198
>AJ006417-1|CAA07022.1| 1248|Homo sapiens beta-tubulin cofactor D
protein.
Length = 1248
Score = 64.9 bits (151), Expect = 2e-10
Identities = 30/87 (34%), Positives = 54/87 (62%)
Frame = +1
Query: 157 CQLIQVGGIVCSKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQQNIDQIIT 336
C ++Q G V ++L QL + LC+ +R+ A+++YE L Y DV V +D+++T
Sbjct: 1134 CGMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDV--VGADVLDEVVT 1191
Query: 337 VLAEIDWERDVSDLRPIRNELCDLMNI 417
VL++ W+ +++ +R RN LCDL+ +
Sbjct: 1192 VLSDTAWDAELAVVREQRNRLCDLLGV 1218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,275,412
Number of Sequences: 237096
Number of extensions: 1659845
Number of successful extensions: 6446
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6439
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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