Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I16
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.9  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   9.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 208 AGPATYYTRYRPPE 167
           AGPA YY + R PE
Sbjct: 409 AGPAKYYLKSRDPE 422


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 223 CYADRYVRRCAAARLYEALTLY 288
           C+A+   RRC    LY+ L L+
Sbjct: 317 CHAEVVARRCLCEYLYKQLELH 338


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 542 LCFFFKFIYIYEYSSKN 592
           +CF F F  + EY++ N
Sbjct: 310 MCFVFVFAALLEYAAVN 326


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 139 DSINVLCQLIQVGGIVCSKSLGQLVI 216
           +S+N    LI+  G++C  S G  +I
Sbjct: 288 ESLNAARMLIRQEGLLCGGSSGAALI 313


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,593
Number of Sequences: 438
Number of extensions: 3279
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)