Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I14
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.53 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.5  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   8.6  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   8.6  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   8.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   8.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   8.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   8.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   8.6  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   8.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 72 DMIDTNDYDLENKSHVNRIKSALT 1
          +  +  DYDLEN+ ++NR +  L+
Sbjct: 7  ESFEITDYDLENEFNINRPRRKLS 30


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 140 ITCRDYQSYLDHL 178
           + C DYQ++L HL
Sbjct: 290 VICEDYQAFLKHL 302


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 334 LTQTIMLTLLCYFLLFSSVISIVLFCVGV 420
           L   +++  L   L+F SV   +L CV +
Sbjct: 22  LLSVLLVGFLFLILIFLSVAGNILVCVAI 50


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 25  YMTLVFQIIVICINHIVKFYYIKNSLVIVE 114
           Y  +VF +  +C N +    Y+  S V+ +
Sbjct: 407 YSRIVFPVCFVCFNLMYWIIYLHISDVVAD 436


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 25  YMTLVFQIIVICINHIVKFYYIKNSLVIVE 114
           Y  +VF +  +C N +    Y+  S V+ +
Sbjct: 407 YSRIVFPVCFVCFNLMYWIIYLHISDVVAD 436


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 444 FSNYLFI*YSNTEQNN*NYRRKQ 376
           +SNY    Y+N   NN NY++ Q
Sbjct: 91  YSNYNN--YNNNNYNNNNYKKLQ 111


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 444 FSNYLFI*YSNTEQNN*NYRRKQ 376
           +SNY    Y+N   NN NY++ Q
Sbjct: 91  YSNYNN--YNNNNYNNNNYKKLQ 111


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 444 FSNYLFI*YSNTEQNN*NYRRKQ 376
           +SNY    Y+N   NN NY++ Q
Sbjct: 91  YSNYNN--YNNNNYNNNNYKKLQ 111


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 444 FSNYLFI*YSNTEQNN*NYRRKQ 376
           +SNY    Y+N   NN NY++ Q
Sbjct: 91  YSNYNN--YNNNNYNNNNYKKLQ 111


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 441 SNYLFI*YSNTEQNN*NYRRK 379
           +NY +  Y+N   NN NY +K
Sbjct: 92  NNYKYN-YNNNNYNNNNYNKK 111


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 441 SNYLFI*YSNTEQNN*NYRRK 379
           +NY +  Y+N   NN NY +K
Sbjct: 92  NNYKYN-YNNNNYNNNNYNKK 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,913
Number of Sequences: 438
Number of extensions: 3056
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)