Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I11
         (573 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E1T1 Cluster: Putative uncharacterized protein; n=2; ...    35   1.6  
UniRef50_A4VF66 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_Q8I5Y7 Cluster: Putative uncharacterized protein; n=3; ...    33   6.3  

>UniRef50_A2E1T1 Cluster: Putative uncharacterized protein; n=2;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 2616

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = -1

Query: 525  NEKYYVIFDINKLNKLKTLATPGEQLVIVKNSNFFFLLETLRN*RCEPC*ALLKCYFI 352
            N + + +FDIN +N      TP E L+++K  NF FL ++    R      LL+CY I
Sbjct: 1811 NRREFSVFDINPMNNTWIYDTPFEMLLLLK--NFVFLAQSDEE-RSAAKRILLECYII 1865


>UniRef50_A4VF66 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 173

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 158 FYCVLT*LLVQHKLKYDYYASIQHE*NYSN-EYSFVYLYEFYNVLLEDFDQ 307
           F+C L  L  + K+K+ + + ++   N+S   Y F YL++FY + +  F +
Sbjct: 118 FFCCLLALFERDKIKFYFLSILKSIINHSKYNYLFFYLFQFYLICISKFKE 168


>UniRef50_Q8I5Y7 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2284

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
 Frame = +1

Query: 46  FIRAHKNN-RFYK---IKYICR*RLLERVRGAFSRVRNTTFFLL 165
           FI+ +KN+ +F K   +KYIC+  ++E V   F+ V+N  F ++
Sbjct: 452 FIKEYKNSEKFVKKKILKYICKNEIIENVSNVFNYVKNIYFVII 495


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,137,553
Number of Sequences: 1657284
Number of extensions: 8529869
Number of successful extensions: 16761
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16749
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)