Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I11
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   3.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.7  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 200 KYDYYASIQHE*NYSNEYSFVYLYEFYNVL-LEDFDQPRS*TVY 328
           KY+Y  +  +  NY+N Y+      +YN++ +E    P    +Y
Sbjct: 330 KYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPIY 373


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 242 SNEYSFVYLYEFYNVLLED 298
           S E S  YL+EF   LL+D
Sbjct: 452 SREGSTTYLWEFLLKLLQD 470


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,432
Number of Sequences: 438
Number of extensions: 3362
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)