Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I10
(246 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47363| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 9e-15
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 1.3
SB_26783| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 26 5.4
SB_56942| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.1
SB_40430| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-19) 25 7.1
SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40) 25 7.1
SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14) 25 7.1
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 25 7.1
SB_22060| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.4
SB_11095| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.4
SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88) 25 9.4
>SB_47363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 74.9 bits (176), Expect = 9e-15
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +1
Query: 1 DILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 111
DILVQYDRSLLVADPRR E KKFGGPGAR+RYQKSYR
Sbjct: 71 DILVQYDRSLLVADPRRTEAKKFGGPGARSRYQKSYR 107
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 5/23 (21%)
Frame = -3
Query: 91 WHGRLDHRISWA-----RNDEGQ 38
WHGRL++R SW+ RND Q
Sbjct: 953 WHGRLNNRYSWSGKPKNRNDRSQ 975
>SB_26783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 35 SLTLVVASPRNSVVQAPVPDTR 100
SL LV+ SP + +AP+P+TR
Sbjct: 15 SLLLVLDSPSQGLQRAPLPETR 36
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 141 YQTMQIEMILTVGFLVSGTGAWTTEF 64
Y T ++ I T G +V+G+G W +
Sbjct: 367 YSTHRVRFIETRGHVVNGSGLWVASY 392
>SB_56942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 88 HGRLDHRISWARNDEGQRPANFCRIEL 8
HGRL+H WA Q P + +I+L
Sbjct: 30 HGRLNHESVWA--SASQSPGEYIQIDL 54
>SB_40430| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-19)
Length = 253
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 141 YQTMQIEMILTVGFLVSGTGAWTTEF 64
Y T ++ I T G +V+G+G W +
Sbjct: 118 YSTHRVRYIETQGQIVNGSGLWVASY 143
>SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40)
Length = 440
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 165 IKENKSRRYQTMQIEMILTVGFLVSGTGAWTT 70
+K + +QT+ + +GFLVSGTG T
Sbjct: 396 LKHREISLWQTLLDGAFVILGFLVSGTGLLAT 427
>SB_24409| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)
Length = 439
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = +2
Query: 17 TTEVCWSLTLVVASPRNSVVQAPVPDTRNPTVNIISICIVWYRLDLFSLINAIPLGVF 190
TT L+ +P N+ PDT+N T C+ + S PL F
Sbjct: 31 TTRTTGILSQDTQTPLNNFYNTEYPDTQNTTCTTGDFCLTTRTTGILSQDTQTPLNNF 88
>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4277
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 121 NDINGRISGIWHGRLDHRISWARNDEGQ 38
N GR++G W R ++R W + D G+
Sbjct: 860 NKKKGRMAGCWAARHNNRKQWLQVDLGK 887
>SB_22060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 151 IETIPNDAN*NDINGRISGIWHGRL 77
I +PNDAN N + +W G L
Sbjct: 530 ITEVPNDANANPLENANLALWAGEL 554
>SB_11095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 109 GRISGIWHGRLDHRISWARNDEGQRPANFCRIEL 8
G ++ W ++ +SW R + + P+ R+EL
Sbjct: 41 GLVTSEWRNQVGRALSWLRKMDRKMPSVCSRLEL 74
>SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88)
Length = 634
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 32 WSLTLVVASPRNSVVQAPVPDTRNPTVNIISICIVWYR 145
W LT + S +N A P T +P ++ I YR
Sbjct: 198 WQLTHIPQSSKNIKRSAFPPQTNSPVFTVVKPWITRYR 235
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,757,110
Number of Sequences: 59808
Number of extensions: 110870
Number of successful extensions: 343
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 16,821,457
effective HSP length: 59
effective length of database: 13,292,785
effective search space used: 292441270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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