Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I09
(520 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25287| Best HMM Match : SLR1-BP (HMM E-Value=0.38) 29 1.7
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_53099| Best HMM Match : SLR1-BP (HMM E-Value=0.38) 29 2.3
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 29 3.0
SB_48975| Best HMM Match : zf-CHY (HMM E-Value=8.5) 29 3.0
SB_43055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_56123| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8) 27 9.3
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_34339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 27 9.3
>SB_25287| Best HMM Match : SLR1-BP (HMM E-Value=0.38)
Length = 100
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 323 PNYRRTYTPNQNDGDECEISDIDEICTHVCGNACTESC*A--SSGSP 457
P Y ++TP +N D C + IC CGN CT+ A S+G P
Sbjct: 45 PKYCGSHTPCENIKD-CTKPNDQCICDEDCGNICTDPSKARFSTGLP 90
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 218 GCDANRGCNYGC 253
GCD N GC YGC
Sbjct: 138 GCDGNYGCGYGC 149
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 218 GCDANRGCNYGC 253
GCD N GC YGC
Sbjct: 158 GCDGNYGCGYGC 169
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 218 GCDANRGCNYGC 253
GCD N GC YGC
Sbjct: 168 GCDGNYGCGYGC 179
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 218 GCDANRGCNYGC 253
GCD N GC YGC
Sbjct: 188 GCDGNYGCGYGC 199
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 218 GCDANRGCNYGC 253
GCD N GC YGC
Sbjct: 198 GCDGNYGCGYGC 209
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 218 GCDANRGCNYGC 253
GCD N GC YGC
Sbjct: 208 GCDGNYGCGYGC 219
>SB_53099| Best HMM Match : SLR1-BP (HMM E-Value=0.38)
Length = 81
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 323 PNYRRTYTPNQNDGDECEISDIDEICTHVCGNACTE 430
P Y ++TP +N D C + IC CGN CT+
Sbjct: 45 PKYCGSHTPCENIKD-CTKPNDQCICDEDCGNICTD 79
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 259 FVTTIVASSVGIAAD*PMAINSHNWPSITTGLGSDILTLL 140
++T +V S I + N I TG+GSD++TLL
Sbjct: 501 YLTVLVGSPPSIRTTSENITETENIAYIVTGIGSDVITLL 540
>SB_48975| Best HMM Match : zf-CHY (HMM E-Value=8.5)
Length = 278
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 137 DCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 196
Query: 356 NDGDECE-ISDIDEICTHVCGNAC 424
G +C I D C V G C
Sbjct: 197 VQGYDCHTIQGYD--CHTVQGYDC 218
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 17 DCHSVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 76
Query: 356 NDGDEC 373
G +C
Sbjct: 77 VQGYDC 82
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 65 DCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHT 124
Query: 356 NDGDEC 373
G +C
Sbjct: 125 VQGYDC 130
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 73 DCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 132
Query: 356 NDGDEC 373
G +C
Sbjct: 133 VQGYDC 138
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 89 DCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 148
Query: 356 NDGDEC 373
G +C
Sbjct: 149 VHGYDC 154
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 129 DCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 188
Query: 356 NDGDEC 373
G +C
Sbjct: 189 VQGYDC 194
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 41 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHT 100
Query: 356 NDGDEC 373
G +C
Sbjct: 101 VHGYDC 106
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + Y +
Sbjct: 49 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHT 108
Query: 356 NDGDEC 373
G +C
Sbjct: 109 VQGYDC 114
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 57 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHT 116
Query: 356 NDGDEC 373
G +C
Sbjct: 117 VQGYDC 122
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 81 DCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 140
Query: 356 NDGDEC 373
G +C
Sbjct: 141 VQGYDC 146
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + Y +
Sbjct: 105 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHT 164
Query: 356 NDGDEC 373
G +C
Sbjct: 165 VQGYDC 170
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 113 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHT 172
Query: 356 NDGDEC 373
G +C
Sbjct: 173 VQGYDC 178
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 121 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHT 180
Query: 356 NDGDEC 373
G +C
Sbjct: 181 VQGYDC 186
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 25 DCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 84
Query: 356 NDGDEC 373
G +C
Sbjct: 85 VHGYDC 90
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQ 355
D V D H G D + Y CH ++ + + G+ +T GY + Y +
Sbjct: 33 DCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHT 92
Query: 356 NDGDEC 373
G +C
Sbjct: 93 VQGYDC 98
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 176 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGY 319
D V D H G D + Y CH I+ + + G+ +T GY
Sbjct: 177 DCHTVQGYDCHTVQGYDCHTVQGYDCHTIQGYDCHTVQGYDCHTVQGY 224
>SB_43055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 290 GFVDNTYTGYRPNYRRTYTPNQNDGDE 370
G ++N Y+GY+P+ Y N DG+E
Sbjct: 50 GSLNNDYSGYQPHPIIVYNDNDVDGEE 76
>SB_56123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 394 DMHTRLW*RMYGILLSELRKPTS-GCYCLKPHSYP 495
++ T LW R+ G+ ++ RKPT GC+ L P P
Sbjct: 20 NLPTSLWRRLTGLGITR-RKPTRRGCHVLPPDPIP 53
>SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8)
Length = 581
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 416 YHRRVCISHRYH*FHIHLRHFDWGY 342
YH +C R+H H+H H Y
Sbjct: 233 YHHHLCHDRRHHYHHVHYDHHHHHY 257
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 3 LDDAGARRSFISSVQVSCLYWYI 71
LDD G R ++ +SCLYW +
Sbjct: 587 LDDHGLRGKAGLTIYISCLYWVV 609
>SB_34339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 188 VMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTG 316
V+ ++S S CD C CH+ + R+V +++ YTG
Sbjct: 226 VILLNSSTSYLCDHQSRCPPNCHQRQKRVCSRLVKALEHVYTG 268
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 320 RPNYRRTYTPNQNDGDECEISDIDEICTHVCGNAC 424
RP Y R +QN D CE+ D D N C
Sbjct: 817 RPLYYRPENRSQNAVDACELCDCDTAGARNSSNIC 851
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,407,899
Number of Sequences: 59808
Number of extensions: 335598
Number of successful extensions: 920
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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