Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I08
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-2|AAB00692.1| 362|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z99171-7|CAB16312.1| 188|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 1.8
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 29 3.1
U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine rece... 28 4.1
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 28 5.4
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 28 5.4
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 28 5.4
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p... 27 7.2
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr... 27 7.2
U28730-1|AAA68261.1| 113|Caenorhabditis elegans Hypothetical pr... 27 7.2
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 27 9.5
>U58755-2|AAB00692.1| 362|Caenorhabditis elegans Hypothetical
protein C34D4.10 protein.
Length = 362
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 349 WIVGQKPQDIGILRGRVDLTYRASSDPLKMHRAL 450
W VG + DIGI+R R D S DPL + AL
Sbjct: 210 WPVGVETCDIGIMRSRTDFKPLGSLDPLLDYPAL 243
>Z99171-7|CAB16312.1| 188|Caenorhabditis elegans Hypothetical
protein F47G4.8 protein.
Length = 188
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 277 TFNNDTSGLVVKWFFKSKSRLVYQWIVGQKPQD 375
T T GL+ +W + S+ + ++ W++G + D
Sbjct: 131 TLRMGTRGLLTRWSYNSRKKAIFGWMMGPQVTD 163
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 442 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 561
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 442 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 561
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 442 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 561
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 442 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 561
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 442 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 561
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 346 QWIVGQKPQDIGILRGRV-DLTYRASSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDED 522
+WI+GQK IGI D +DPL HR + + NT + C ++D +
Sbjct: 322 KWILGQKFAGIGISHALFDDPRGDCGTDPLPAHRLVMELIRNTIPANPAKCTRLCYLDPE 381
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 367 PQDIGILRGRVDLTYRASSDPL 432
P+DIG L GR++L A+ DPL
Sbjct: 614 PRDIGKLNGRLELVTLAAEDPL 635
>U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 7 protein.
Length = 339
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 76 RSIVLWYGDSYEMVRRRVDRVSLTHLCTILLLVTCFHVI 192
+ +V WYG + + RRV VSL+ L + V+ ++
Sbjct: 175 KEVVFWYGGFFVIYHRRVGWVSLSKLHLTFIFVSISFIL 213
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 415 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV 552
A SD + L II++ N++ +G Y CV + + + +T + VF+
Sbjct: 286 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 332
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 415 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV 552
A SD + L II++ N++ +G Y CV + + + +T + VF+
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 305
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 415 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV 552
A SD + L II++ N++ +G Y CV + + + +T + VF+
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 305
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 415 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV 552
A SD + L II++ N++ +G Y CV + + + +T + VF+
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFL 305
>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +1
Query: 184 HVIRGVKITKMVVPEIIQYGVEDAVILDCDYTFNNDTSGLVVKWFFKSKSRLVYQWIVGQ 363
HV+ +T+M + ++ + + D+T+ N V F+K + V+ +
Sbjct: 411 HVVISPNLTRMPIFQLYGLNSDYDQVALVDFTYTNSVMVPNVTLFYKDEGGAVWSYYGHS 470
Query: 364 KPQDIGI 384
+P DI I
Sbjct: 471 RPLDIPI 477
>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +1
Query: 184 HVIRGVKITKMVVPEIIQYGVEDAVILDCDYTFNNDTSGLVVKWFFKSKSRLVYQWIVGQ 363
HV+ +T+M + ++ + + D+T+ N V F+K + V+ +
Sbjct: 411 HVVISPNLTRMPIFQLYGLNSDYDQVALVDFTYTNSVMVPNVTLFYKDEGGAVWSYYGHS 470
Query: 364 KPQDIGI 384
+P DI I
Sbjct: 471 RPLDIPI 477
>U28730-1|AAA68261.1| 113|Caenorhabditis elegans Hypothetical
protein K10B2.4 protein.
Length = 113
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 83 SFCGMVIHMRWCEGGLTVC 139
S CG++I M+WC VC
Sbjct: 46 SMCGLMIRMKWCSWLALVC 64
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 391 GRVDLTYRASSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQM 540
G+ L SS LK+ + ++ ++ GD T V+ + D+K + +
Sbjct: 216 GKTTLLKMISSQQLKIPAGISMLSVEQEVEGDDTLVLDAVLMSDTKRQTL 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,476,324
Number of Sequences: 27780
Number of extensions: 282738
Number of successful extensions: 889
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -