Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I04
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   3.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   3.8  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    22   3.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.8  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 259 SVYWKRHWAWNE 294
           SV+W   W WNE
Sbjct: 166 SVFWGSAWQWNE 177


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 411 AAEHAHLWSELVFLYDKYEEYDNA 482
           A E  + WS + + YD  E  D+A
Sbjct: 153 AMELVYAWSTIDYTYDSIEARDSA 176


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 465 EEYDNAALTMMQHPTEAW 518
           EEY   A ++ Q P E W
Sbjct: 613 EEYTEEAYSVAQEPEEEW 630


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 498 QHPTEAWREGHFKDIITKVANME 566
           +HP +  RE  FKD    + N E
Sbjct: 358 KHPLDLLREADFKDTEILIGNNE 380


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 477 NAALTMMQHPTEAWREGHF 533
           NA +T+   P   W EGH+
Sbjct: 99  NAIVTIDATPFRQWYEGHY 117


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 498 QHPTEAWREGHFKDIITKVANME 566
           +HP +  RE  FKD    + N E
Sbjct: 358 KHPLDLLREADFKDTEILIGNNE 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,926
Number of Sequences: 438
Number of extensions: 3056
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)