Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_I03
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   1.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   5.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   5.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   5.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 288 NSCPRPNCRNPV 253
           N CP P C  PV
Sbjct: 87  NECPEPTCDEPV 98


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 16/73 (21%), Positives = 34/73 (46%)
 Frame = +3

Query: 135 SAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRLGFYNWDEGNYFRTLDGQTL 314
           + E   +++I  + +  + +++   +P Q L   F  I+ L        + FRT+ G+T+
Sbjct: 323 TTESAKISVIQDDAQMRLNKHVTTTYPKQPLR--FGKILLL------VSSTFRTISGRTI 374

Query: 315 EAAGYAKWAKGQP 353
           E   + K  +  P
Sbjct: 375 EDLFFKKVIRDTP 387


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 190 KTSASVSLLMMARWPPSAEQIAA 122
           KTS    LL+ A  P S E IAA
Sbjct: 667 KTSGQPRLLLTAAVPASFEAIAA 689


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 405 ATLDDTLCDDHLAFICEKDPKKLQT 479
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 405 ATLDDTLCDDHLAFICEKDPKKLQT 479
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 405 ATLDDTLCDDHLAFICEKDPKKLQT 479
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 405 ATLDDTLCDDHLAFICEKDPKKLQT 479
           AT+D+   D H   +  + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 104 SYAMKLVTLVSPLVHFILFISGSTFCHY 21
           +Y++ +V +   L +FI  +    +CHY
Sbjct: 174 TYSLFIVFMTVILPYFINLLMELQYCHY 201


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 255 LGFYNWDEGNYFRTLDGQTLEA 320
           +GF  WD+    R+ +G+  EA
Sbjct: 108 IGFIEWDKVEIVRSQEGRFEEA 129


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 104 SYAMKLVTLVSPLVHFILFISGSTFCHY 21
           +Y++ +V +   L +FI  +    +CHY
Sbjct: 174 TYSLFIVFMTVILPYFINLLMELQYCHY 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,798
Number of Sequences: 336
Number of extensions: 2325
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)