Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I03
(529 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21) 39 0.003
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19) 35 0.048
SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 35 0.048
SB_56031| Best HMM Match : Lectin_C (HMM E-Value=3.3e-08) 34 0.063
SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05) 33 0.15
SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05) 33 0.15
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 33 0.19
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 30 1.0
SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06) 29 1.8
SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10) 28 4.1
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19) 27 9.6
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +3
Query: 81 CYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRLG 260
CYKF + + + +A C GG+L +++ E L + Q + + G
Sbjct: 133 CYKFSTSSKTWLIAQQDCHQSGGYLVKVDNSDEQHFLSYMMKTVMKQAAWIGLNDRAIEG 192
Query: 261 FYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDAT---LDDTLCD 431
Y W+ N T GQ Y+ W G+P++ S ++C M+ + +D CD
Sbjct: 193 TYVWEGDN---TKLGQ-----NYSHWYSGEPNDHAS--VEDCISMYSGSLGGFWNDDYCD 242
Query: 432 DHLAFICEK 458
A++CEK
Sbjct: 243 TLRAYVCEK 251
Score = 30.7 bits (66), Expect = 0.78
Identities = 27/124 (21%), Positives = 47/124 (37%)
Frame = +3
Query: 3 NHTKDLVMTECGTTDKEYKMDQRTNKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEA 182
N D+ +E G +K + CY+F+ + +S A C A GG L I S E
Sbjct: 926 NDVTDIYNSEFGNCKTGWK--EFGQFCYQFNMEKKSWSAARQQCQANGGDLVSIQSPVEQ 983
Query: 183 EVLRNLFAQHPAQTLTVSFDVIIRLGFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQ 362
+ Q + +G ++ + + DG + + W QPDN
Sbjct: 984 AHITLEVGQFGVREYA-------WIGLHDESVESAWEWSDGSPVR---FTNWCNNQPDNW 1033
Query: 363 FSRQ 374
+++
Sbjct: 1034 LAQE 1037
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 327 YAKWAKGQPDNQFSRQKQNCGGMFRDATLDDTLCDDHLAFICE 455
Y W +G+P+N F + +++D +D C +FIC+
Sbjct: 73 YTNWRRGEPNN-FQDNEDCTELLYQDGLWNDDDCSKEYSFICK 114
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 40.7 bits (91), Expect = 7e-04
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +3
Query: 33 CGTTDKEYKMDQRTNKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQH 212
C + +++ Q + C+KF S RP+ A+ C GG+L I+S E + NLF
Sbjct: 1528 CSRCLEGWEIYQANHSCFKFVSEKRPWKDASRYCQNIGGNLTSIHSAEENVFVSNLFLIG 1587
Query: 213 PAQTLTVSFDVIIRLGFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGG 392
+ + + + W +G + + +WA +P + + + ++C
Sbjct: 1588 EGNAYWIGLNDLKNEKAFVWSDGT-----------SVDFTQWAFNKPSD--NGKDKDCTY 1634
Query: 393 MFRDA-TLDDTLCDDHLAFIC 452
+ + + T D C + F+C
Sbjct: 1635 LLKQSKTWIDFSCANSYPFVC 1655
>SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21)
Length = 276
Score = 38.7 bits (86), Expect = 0.003
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = +3
Query: 120 AAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRLGFYNWDEGNYFRTL 299
A +C +G LA I E E + LR ++ P + F +G + ++ +
Sbjct: 151 AQELCEQDGAMLAYIEDEEEFQFLRR--SRPPGSSTNQYF-----IGLRSANDSKTWLWP 203
Query: 300 DGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGM-FR---DATLDDTLCDDH--LAFICEKD 461
DG A + KWAKG+P+N + ++C M FR + + +D LC + +IC+
Sbjct: 204 DGTK---AKFFKWAKGEPNN-YQGNTEDCVAMDFRSLSNGSYNDVLCQESSVSGYICKGS 259
Query: 462 PKKL 473
P L
Sbjct: 260 PMPL 263
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 37.5 bits (83), Expect = 0.007
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 8/156 (5%)
Frame = +3
Query: 60 MDQRTNKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTV-- 233
+D+ CY FH + ++ CS GG L ++ ++ E F QT TV
Sbjct: 182 VDKECESCYSFHDDIMSWLLSRQQCSVAGGDLVVMETKEEW-----AFITEQIQTKTVPD 236
Query: 234 -SFDVIIRLGF-YNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRD- 404
S + I + NW +G + +G KW G+P Q+ + + RD
Sbjct: 237 GSNESFIGMEIPDNWKKGEPLKWKNGANFTLTD--KWQSGKPTANEGEQRTSSVLISRDY 294
Query: 405 ---ATLDDTLCDDHLAFICEKDPKKLQTAKIAPRTI 503
+L+ D H ICE Q ++ PR I
Sbjct: 295 MFKGSLNSIRYDLHRGRICEYKKDCSQAGRV-PRCI 329
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 36.7 bits (81), Expect = 0.012
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Frame = +3
Query: 81 CYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSF---DVII 251
CY+F+S R + A +C GG L I S E + TL V F
Sbjct: 1526 CYQFNSDKRNWQSARLMCQNRGGELVSILSPVEQAHI----------TLEVGFFGLSTFA 1575
Query: 252 RLGFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDATL----DD 419
+GF++ + + DG + + W QPDN + ++C + + +D
Sbjct: 1576 WIGFHDKTIESAWEWSDGSPVR---FTNWWNYQPDNWIN--SEDCAHTYHQTSAMGRWND 1630
Query: 420 TLCDDHLAFICEKD 461
C ++A+IC++D
Sbjct: 1631 ISCYTNMAYICKRD 1644
>SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 21 VMTECGTTDK---EYKMDQRTNKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVL 191
+ T+CG D + KCY +V P++ A C G L I+N+ E E +
Sbjct: 47 LQTKCGVIDSSTCDSSWHYFDGKCYFLSTVEEPWTAAERSCRVRGSTLVIVNNLMENEFI 106
Query: 192 RNL 200
R+L
Sbjct: 107 RSL 109
>SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 336 WAKGQPDNQFSRQKQNCGGM-FRDATLDDTLCDDHLAFICEK 458
W G+P+N SR +NC M + D +D LC + ++CEK
Sbjct: 109 WGYGEPNNYMSR-GENCSEMRYWDGMWNDVLCVNKYGYVCEK 149
>SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19)
Length = 951
Score = 34.7 bits (76), Expect = 0.048
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 6/132 (4%)
Frame = +3
Query: 81 CYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRLG 260
CYKFH + A C+ E L ++SE E + + L + I+ G
Sbjct: 132 CYKFHMTKDTWINAFHECTRENSTLLSVHSEEEVYYIDRVSISGRDGPLWTGLNDRIKKG 191
Query: 261 FYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGM-FRDA-----TLDDT 422
Y++ DG ++E Y W G+P S++ + C GM +D+ ++ D
Sbjct: 192 MYSY--------TDGSSVE---YLDWIPGEP----SQKGEQCIGMRLKDSLNPYGSMADL 236
Query: 423 LCDDHLAFICEK 458
C F+C K
Sbjct: 237 NCKQKHQFVCRK 248
>SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 577
Score = 34.7 bits (76), Expect = 0.048
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 75 NKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETE-AEVLRNL 200
+ CY+ + P+S A +C EGG L I+S E A +LRN+
Sbjct: 165 DSCYRMSYIKLPWSEAREVCKKEGGDLVSIHSAFEQAFLLRNM 207
>SB_56031| Best HMM Match : Lectin_C (HMM E-Value=3.3e-08)
Length = 129
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 78 KCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNL 200
KCY +V P++ A C G L I+N+ E E +R+L
Sbjct: 12 KCYFLSTVEEPWTAAERSCRVRGSTLVIVNNLMENEFIRSL 52
>SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 33.5 bits (73), Expect = 0.11
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 8/156 (5%)
Frame = +3
Query: 60 MDQRTNKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTV-- 233
+D+ CY FH + ++ CS GG L ++ ++ E F QT TV
Sbjct: 340 VDKECESCYSFHDDIMTWLLSRQQCSVAGGDLVVMETKEEW-----AFITEQIQTKTVPD 394
Query: 234 -SFDVIIRLGF-YNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRD- 404
S + I + NW +G + +G KW G+P Q+ + + RD
Sbjct: 395 GSNESFIGMEIPDNWKKGEPLKWKNGANFTLTD--KWQSGKPTANEGEQRTSSVLISRDY 452
Query: 405 ---ATLDDTLCDDHLAFICEKDPKKLQTAKIAPRTI 503
+L+ D ICE Q ++ PR I
Sbjct: 453 MFKGSLNSIGYDLQRGRICEYKKDCSQAGRV-PRCI 487
>SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05)
Length = 131
Score = 33.1 bits (72), Expect = 0.15
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +3
Query: 288 FRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDATL----DDTLCDD--HLAFI 449
F +DG TL ++ Y+ W QPDN S +NCG L +D C++ A
Sbjct: 68 FFWVDGTTLTSSSYSAWYPPQPDN--SGGHENCGHFLLSGKLARRWNDISCNNSYQFAIA 125
Query: 450 CEK 458
C+K
Sbjct: 126 CQK 128
>SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05)
Length = 322
Score = 33.1 bits (72), Expect = 0.15
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Frame = +3
Query: 60 MDQRTNKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTV-- 233
+D+ CY FH + ++ CS GG L ++ ++ E F QT TV
Sbjct: 186 VDKECESCYSFHDDIMTWLLSRQQCSVAGGDLVVMETKEEW-----AFITEQIQTKTVPD 240
Query: 234 -SFDVIIRLGF-YNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRD 404
S + I + NW +G + +G KW G+P Q+ + + RD
Sbjct: 241 GSNESFIGMEIPDNWKKGEPLKWKNGANFTLTD--KWQSGKPTANEGEQRTSSVLISRD 297
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +3
Query: 78 KCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRL 257
KCYKF R + A C+ + L I + E +++++ ++ V I +
Sbjct: 156 KCYKFFPGPRAWESAVQRCTEQFASLVTIENSIEEAMVKSMLTENKRNYTWVGMSDINQP 215
Query: 258 GFYNWDEG--NYFRTLDGQTLEAAG 326
G + W +G F D Q + G
Sbjct: 216 GTFMWVDGMSPNFNNWDMQQMNVEG 240
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 72 SFGPFYTLYQWFHILSLLD 16
+FG +Y+LY+WFH L L D
Sbjct: 165 TFGLYYSLYEWFHPLYLED 183
>SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +3
Query: 324 GYAKWAKGQPDNQFSRQKQNCGGMFRDAT---LDDTLCDDHLAFICE 455
G WA GQP + + Q+++C M + D C + L FIC+
Sbjct: 346 GRPNWAPGQPTGRSNGQEKDCVAMVMHPSPGKWHDEYCLNQLPFICK 392
>SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06)
Length = 583
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +3
Query: 39 TTDKEYKMDQR----TNKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNL 200
TT YK Q KCY + S ++ C + LAIIN E E +R +
Sbjct: 87 TTYLRYKCKQGWYYYNGKCYHYSSFEETWTQGQRYCLDQDADLAIINDREENEFIRTI 144
>SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 414 DDTLCDDHLAFICEKD-PKKLQTAKIAPRT 500
+D CD +ICEKD PK++ AP T
Sbjct: 210 NDNSCDHQQGYICEKDKPKEVLATGDAPHT 239
>SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10)
Length = 202
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +3
Query: 75 NKCYKFHSVGRPYSVAAAICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDV-II 251
N CY + + A C A+G LA I++ E+ ++ +L L S+D +
Sbjct: 111 NACYGLTLDKKTWPDARDSCRAQGAELASIHTGWESALVTSL--------LVTSWDAGDV 162
Query: 252 RLGFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQ 362
+G + ++ +R DG ++ + W G+P+++
Sbjct: 163 WIGLTDTNQRGIYRWTDGSPVD---WTNWWNGEPNDR 196
>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
Length = 1341
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Frame = +3
Query: 75 NKCYKFHSVGRPYSVAAAICSAE-GGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVII 251
N CYK +S A C L + S++E + +RN A ++ + F+
Sbjct: 1159 NHCYKLVETTMSWSDAEEACKRSFNSSLLSLASQSELDYVRN--AVQDGNSVWIGFNDKG 1216
Query: 252 RLGFYNWDEGNYFRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNC 386
R G + W + + + W+ +P+N R+ ++C
Sbjct: 1217 REGRWEWTDRS-----------PVTFKNWSPNEPNNGGFRENEDC 1250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,051,400
Number of Sequences: 59808
Number of extensions: 306171
Number of successful extensions: 685
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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