Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_I01
(444 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43) 47 6e-06
SB_51175| Best HMM Match : p450 (HMM E-Value=0) 47 8e-06
SB_15472| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_51609| Best HMM Match : p450 (HMM E-Value=0) 46 1e-05
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_21442| Best HMM Match : p450 (HMM E-Value=0) 43 1e-04
SB_42733| Best HMM Match : p450 (HMM E-Value=9e-10) 42 2e-04
SB_19361| Best HMM Match : Ribosomal_S23p (HMM E-Value=9.8) 42 2e-04
SB_34556| Best HMM Match : p450 (HMM E-Value=0) 42 3e-04
SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_5471| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_1738| Best HMM Match : p450 (HMM E-Value=0) 40 0.001
SB_46340| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_35141| Best HMM Match : p450 (HMM E-Value=0) 40 0.001
SB_2334| Best HMM Match : p450 (HMM E-Value=0) 40 0.001
SB_15630| Best HMM Match : p450 (HMM E-Value=0) 38 0.004
SB_59709| Best HMM Match : p450 (HMM E-Value=8e-16) 38 0.005
SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09) 36 0.015
SB_56127| Best HMM Match : p450 (HMM E-Value=2.3e-07) 35 0.026
SB_55109| Best HMM Match : fn3 (HMM E-Value=0.017) 32 0.19
SB_11308| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_19505| Best HMM Match : PP-binding (HMM E-Value=9) 31 0.43
SB_10893| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_43777| Best HMM Match : PP-binding (HMM E-Value=9) 31 0.43
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.3
SB_54151| Best HMM Match : PAN (HMM E-Value=0.00084) 27 9.2
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_9306| Best HMM Match : Fibrinogen_C (HMM E-Value=0.035) 27 9.2
>SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43)
Length = 440
Score = 47.2 bits (107), Expect = 6e-06
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 317 PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNF 421
PY+YLP G GP NC G+RF Q + ALV ++ F
Sbjct: 372 PYSYLPFGHGPHNCVGMRFAQMEMKLALVRVLKKF 406
>SB_51175| Best HMM Match : p450 (HMM E-Value=0)
Length = 408
Score = 46.8 bits (106), Expect = 8e-06
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLP 439
F + K PY YLP GEGP NC G+RF + ALV I+ ++ + P
Sbjct: 339 FTAEAKQARHPYAYLPFGEGPRNCIGMRFALLKVKMALVYILRHYRLERCP 389
>SB_15472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 46.8 bits (106), Expect = 8e-06
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLP 439
F + K PY YLP GEGP NC G+RF + ALV I+ ++ + P
Sbjct: 25 FTAEAKQARHPYAYLPFGEGPRNCIGMRFALLKVKMALVYILRHYRLERCP 75
>SB_51609| Best HMM Match : p450 (HMM E-Value=0)
Length = 526
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNF 421
F P+ K PY Y+P G GP NC G+RF Q + LV ++ +
Sbjct: 450 FSPEGKASRDPYAYMPFGHGPHNCIGMRFAQMEIKLVLVRMLKRY 494
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLP 439
F P+ K PYT+LP G GP +C G RF + L I+ +++ P
Sbjct: 439 FSPEAKQARDPYTFLPFGHGPRDCIGKRFAFMEMKLVLSRILRRYDIKTTP 489
>SB_21442| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIIS 415
F P+ + P+TYLP G GP C G+RF + LV I++
Sbjct: 422 FSPEQESTRHPFTYLPFGAGPRQCVGMRFANMVMKITLVQILA 464
>SB_42733| Best HMM Match : p450 (HMM E-Value=9e-10)
Length = 258
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNF 421
F P+ K PY+Y+P G GP C G+RF + L++++ F
Sbjct: 183 FSPEAKEKRHPYSYMPFGMGPRQCIGMRFAMLEIKICLMAVLEKF 227
>SB_19361| Best HMM Match : Ribosomal_S23p (HMM E-Value=9.8)
Length = 126
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNF 421
F + K PY YLP G GP NC G+RF + AL I+ +
Sbjct: 50 FTAEAKQSRSPYAYLPFGAGPRNCVGMRFSLMEIKLALTRILKKY 94
>SB_34556| Best HMM Match : p450 (HMM E-Value=0)
Length = 408
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 245 PNSFQNLRNSILKDFCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNF 421
P+ ++N + F P+ K PY+++P G GP C G+RF + L++++ F
Sbjct: 319 PDLWENPEEFDPEHFSPEAKEKRHPYSFMPFGVGPRQCIGMRFALLEIKMCLMAVLEKF 377
>SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLP 439
F + K PY +LP G GP NC G+RF ALV I+ ++ + P
Sbjct: 164 FTAEAKQARHPYAHLPFGGGPRNCIGMRFALLEVTMALVYILRHYRLERCP 214
>SB_5471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLP 439
F + K PY +LP G GP NC G+RF + ALV I+ + + P
Sbjct: 464 FTAEAKQARHPYAHLPFGGGPRNCIGMRFALLEAKMALVYILRYYRLERCP 514
>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
Length = 484
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 317 PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFE 424
PY+++P G GP C G+RF + ALV+I+ ++
Sbjct: 417 PYSFIPFGMGPRQCIGMRFALMEIKIALVNILEKYK 452
>SB_46340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNF 421
F + K PY YLP GP NC G+RF + AL I+ +
Sbjct: 7 FTAEAKQSRNPYAYLPFSAGPRNCIGMRFSLMEIKLALTRILKKY 51
>SB_35141| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 317 PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLPN 442
P+ ++P G GP NC G+RF + L I+S ++ + P+
Sbjct: 498 PFQFIPFGAGPRNCIGMRFALNEVKLVLFQILSKYKFVRSPD 539
>SB_2334| Best HMM Match : p450 (HMM E-Value=0)
Length = 498
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 317 PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLPN 442
P+ ++P G GP NC G+RF + L I+S ++ + P+
Sbjct: 431 PFQFIPFGAGPRNCIGMRFALNEVKLVLFQILSKYKFVRSPD 472
>SB_15630| Best HMM Match : p450 (HMM E-Value=0)
Length = 965
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 317 PYTYLPIGEGPTNCFGLRF 373
PY+YLP G GP NC G+RF
Sbjct: 442 PYSYLPFGHGPHNCIGMRF 460
>SB_59709| Best HMM Match : p450 (HMM E-Value=8e-16)
Length = 377
Score = 37.5 bits (83), Expect = 0.005
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 317 PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFE 424
PY+++P G P C G+RF + ALV+I+ ++
Sbjct: 310 PYSFIPFGMSPRQCIGMRFALMEIKIALVNILEKYK 345
>SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09)
Length = 307
Score = 35.9 bits (79), Expect = 0.015
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNF 421
F + K P YLP GP NC G+RF + AL I+ +
Sbjct: 229 FTAEAKQSRNPCAYLPFSAGPRNCVGMRFSLMELKLALTRILKKY 273
>SB_56127| Best HMM Match : p450 (HMM E-Value=2.3e-07)
Length = 259
Score = 35.1 bits (77), Expect = 0.026
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 287 FCPKTKLVS*PYTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVL 430
F P+ PY ++P G NC G RF + L I+ NF+++
Sbjct: 179 FLPENSEGRHPYAFVPFSAGSRNCIGQRFALLEEKVVLAYILHNFDIV 226
>SB_55109| Best HMM Match : fn3 (HMM E-Value=0.017)
Length = 339
Score = 32.3 bits (70), Expect = 0.19
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -1
Query: 297 FGQKSFRIEFLRFWKEFGIPVHAHGVHNRQVYLRK 193
F QK R EF R+W FG VH G +RQ +L K
Sbjct: 255 FNQKQVR-EFFRYWFSFGFRVHFKG--SRQTFLAK 286
>SB_11308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 32.3 bits (70), Expect = 0.19
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 320 YTYLPIGEGPTNCFGLRFGQQT*RFALVSIISNFEVLPLP 439
Y Y P GP NC G +F Q + L F++ +P
Sbjct: 123 YAYFPFSLGPHNCIGTQFAQLETKLVLARTFQTFKMTLVP 162
>SB_19505| Best HMM Match : PP-binding (HMM E-Value=9)
Length = 169
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 439 RQWKDFEVRDDRDQSEALCLLSETKAKTICRP 344
R WKDF +RDDR++ E L E+ C P
Sbjct: 79 RSWKDF-LRDDRNKEELFKFLGESFVTADCHP 109
>SB_10893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 439 RQWKDFEVRDDRDQSEALCLLSETKAKTICRP 344
R WKDF +RDDR++ E L E+ C P
Sbjct: 267 RSWKDF-LRDDRNKEELFKFLGESFVTADCHP 297
>SB_43777| Best HMM Match : PP-binding (HMM E-Value=9)
Length = 169
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 439 RQWKDFEVRDDRDQSEALCLLSETKAKTICRP 344
R WKDF +RDDR++ E L E+ C P
Sbjct: 79 RSWKDF-LRDDRNKEELFKFLGESFVTADCHP 109
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 28.7 bits (61), Expect = 2.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +2
Query: 47 PYITLVNTFELCKIKSITTFHKDFKKISTDGLD*PSCRSRLRDRR*TYHFRRYTCLL*T- 223
PY T + C IK+ HK T P C RD Y +R+ + T
Sbjct: 882 PYFTRTRALKQCNIKNSLRKHKREDDTETKPFQCPHCDYAFRD---IYKLQRHLSVHTTE 938
Query: 224 -PWACTGIPNSFQNL 265
CT P S+++L
Sbjct: 939 RTHKCTKCPGSYKSL 953
>SB_54151| Best HMM Match : PAN (HMM E-Value=0.00084)
Length = 326
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 56 TLVNTFELCKIKSITTFHKDFKKISTDGL 142
TLV E K +TTF+ D++ IST+ L
Sbjct: 154 TLVTRNEPLKRSLVTTFYADYRYISTEKL 182
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 38 MFQPYITLVNTFELCKIKSITTFH 109
MF I L+N C ++S+TT H
Sbjct: 693 MFNALIRLINRALQCSVRSVTTIH 716
>SB_9306| Best HMM Match : Fibrinogen_C (HMM E-Value=0.035)
Length = 232
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 56 TLVNTFELCKIKSITTFHKDFKKISTDGL 142
TLV E K +TTF+ D++ IST+ L
Sbjct: 53 TLVTRNEPLKRSLVTTFYADYRYISTEKL 81
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,251,435
Number of Sequences: 59808
Number of extensions: 253711
Number of successful extensions: 810
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -