Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H23
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 68 5e-12
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 61 6e-10
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 58 5e-09
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 55 4e-08
05_06_0162 - 26080750-26081478 49 3e-06
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 49 3e-06
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 44 9e-05
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 39 0.003
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 36 0.018
01_01_0746 + 5772340-5773083 35 0.042
11_03_0046 - 9309754-9309820,9310414-9311132 32 0.39
03_01_0180 + 1456182-1456359,1456444-1456520,1456570-1456692,145... 32 0.39
04_03_0824 + 20086639-20087263,20087282-20087463,20087569-200877... 31 0.52
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 31 0.52
06_01_0303 + 2194345-2194414,2195228-2195328,2195818-2196657,219... 31 0.69
03_05_0633 + 26276454-26277368 29 2.1
08_02_0930 - 22704382-22705329 29 2.8
11_06_0583 + 25213680-25213827,25213920-25214335 29 3.7
08_02_1284 - 25864049-25864202,25864690-25864880,25865053-258658... 29 3.7
04_03_0150 + 11877714-11878487,11880928-11881245 28 6.4
03_05_0470 - 24647118-24647267,24647387-24647528,24649070-24650256 28 6.4
11_06_0594 + 25349612-25352530 27 8.5
06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,344... 27 8.5
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 68.1 bits (159), Expect = 5e-12
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +2
Query: 122 LVDLTVDNEGIAVLTMQRPPV-NSLNLELLQDISKSLDDVGKNKS-KGMILASSSPTVFS 295
L L+ + GI + ++RP N++ E+LQ + +++ V + + K ++LASS P VF
Sbjct: 44 LQKLSAPDSGIVEMRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFC 103
Query: 296 AGLDIMEMYKPDLKRAETFWTALQDVWLKLYGSSFPTAAAINGHAPAGGCLFSLSCEYRV 475
AG D+ E F +L+ +L S PT A + G A GG +LSC+ R+
Sbjct: 104 AGADLKERRLMSPCEVREFVNSLRSTFLSFEALSIPTIAIVEGAAFGGGLELALSCDLRI 163
Query: 476 MANGKYSIGLNETALGIV 529
+ L ET L I+
Sbjct: 164 CGENA-TFSLPETGLAII 180
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 61.3 bits (142), Expect = 6e-10
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +2
Query: 128 DLTVDNEGIAVLTMQRPPVNSLNLELLQDISKSLDDVGKNKSKGMILASSSPTVFSAGLD 307
++ V G+A++T+ PPVN+L++ +L + ++ + I+ + VFS GLD
Sbjct: 8 EMEVRPGGVALITISNPPVNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGGLD 67
Query: 308 IMEMYKPDLKRAETF---WTALQDVWLKLYGSSFPTAAAINGHAPAGGCLFSLSCEYRVM 478
I +AE + ++ + L + P+ AAING A GG S+ C+ R+
Sbjct: 68 INTFGAIQRNKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQARI- 126
Query: 479 ANGKYSIGLNETALGIV 529
+ +GL E LG++
Sbjct: 127 SIPTAQLGLPELQLGVI 143
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/145 (24%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = +2
Query: 104 SAKAGPLVDLTVDNEGIAVLTMQRPPVNSLNLELLQDISKSLDDVGKNKSKGMILASSSP 283
+A A ++ V +G+AV+T+ PPVNSL++++L + ++ + + I+ +
Sbjct: 4 AAAAKGRTEMEVGADGVAVITICNPPVNSLSIDVLLSLKENYAEALRRNDVKAIVVTGKG 63
Query: 284 TVFSAGLDIM---EMYKPDLKRAETFWTALQDVWLKLYGSSFPTAAAINGHAPAGGCLFS 454
FS G DI + +++ + + ++ + L ++ P+ AAI+G A GG +
Sbjct: 64 GKFSGGFDISSFGSVQGGKVEQPKVGYISIDIITDTLEAATKPSVAAIDGLALGGGLEVA 123
Query: 455 LSCEYRVMANGKYSIGLNETALGIV 529
++C R+ + +GL E LG++
Sbjct: 124 MACHARI-STPTAQLGLPELQLGVI 147
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 55.2 bits (127), Expect = 4e-08
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Frame = +2
Query: 137 VDNEGIAVLTMQRPPVNSLNLELLQDISKSLDDVGKNKSKGMILASSSPTVFSAGLDIME 316
V +G+AV+T+ PPVN+L+L+++ + + + + I+ + + FS G DI
Sbjct: 10 VRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGRFSGGFDINA 69
Query: 317 MYKPDLKRAE--TFWTALQDVWLK---LYGSSFPTAAAINGHAPAGGCLFSLSCEYRVMA 481
K K +F L +K L + P+ AAI+G A GG + C RV +
Sbjct: 70 FDKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVAAIDGVALGGGLELVMVCHARV-S 128
Query: 482 NGKYSIGLNETALGIV 529
+GL E LGI+
Sbjct: 129 TSSAQLGLPELQLGII 144
>05_06_0162 - 26080750-26081478
Length = 242
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/86 (34%), Positives = 45/86 (52%)
Frame = +2
Query: 290 FSAGLDIMEMYKPDLKRAETFWTALQDVWLKLYGSSFPTAAAINGHAPAGGCLFSLSCEY 469
FS GLDI P + E AL+ + L PT AA+ GHA AGG L +L +Y
Sbjct: 60 FSNGLDIGPGGIPPSRVGELV-VALRPLAADLLALPMPTVAAVTGHASAGGFLLTLCHDY 118
Query: 470 RVMANGKYSIGLNETALGIVAPRWFM 547
R+M + + ++E +G+ P +F+
Sbjct: 119 RLMRADRGVLYMSEIDIGLPLPPYFV 144
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 48.8 bits (111), Expect = 3e-06
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Frame = +2
Query: 125 VDLTVDNEGIAVLTMQRPPVNSLNLELLQDI-SKSLDDVGKNKSKGMILASSSPTVFSAG 301
V + V +G+AV+T+ PPVN+L+ ++Q + K + + ++ K ++L + F G
Sbjct: 7 VTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGK-FCGG 65
Query: 302 LDIMEMYKPDLKRAETFWTALQDVWLKLYGSSF-----PTAAAINGHAPAGGCLFSLSCE 466
DI ++ K + + DV ++L + P+ AAI G A GG ++ C
Sbjct: 66 FDI-NVFTEVHKTGNV--SLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCH 122
Query: 467 YRVMANGKYSIGLNETALGIV 529
R+ + + +GL E LGI+
Sbjct: 123 ARI-STPEAQLGLPELTLGII 142
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +2
Query: 98 LMSAKAGPLVDLTVDNEGIAVLTMQRPP-VNSLNLELLQDISKSLDDVGKNKS-KGMILA 271
+ +A A V V G+AV+T+ RP +N++NLE+ LD+ N S K +++
Sbjct: 1 MAAAAAEEFVKGRVTPNGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVE 60
Query: 272 SSSPTVFSAGLDIMEM 319
SSSP FSAG D+ +
Sbjct: 61 SSSPRAFSAGGDVKRL 76
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Frame = +2
Query: 152 IAVLTMQRPPV-NSLNLELLQDISKSLDDVGKNKSKGMILASSS-PTVFSAGLDIMEMYK 325
I L ++RP V N++N E ++ + ++ V + + ++L +SS P VF AG D+ +
Sbjct: 47 IVELRLERPEVKNAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADLKAL-- 104
Query: 326 PDLKRAETFWTALQDVWLKLYGSSFPTAAAINGHAPAGGCLFSLSCEYRVMANGKYSIGL 505
S PT A I G A GG +LSC+ R+ ++GL
Sbjct: 105 -----------------------SIPTIAVIEGAALGGGLELALSCDLRICGENA-TLGL 140
Query: 506 NETALGIV 529
ET L I+
Sbjct: 141 PETGLAII 148
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 36.3 bits (80), Expect = 0.018
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Frame = +2
Query: 53 RYLINNVKSAVPNCRLMSAKAGP-LVDLTVDN---EGIAVLTMQRPPV-NSLNLELLQDI 217
R + +V S P R + ++G VD+ D EGIA +T+ RP N+ ++++
Sbjct: 44 RRVHGDVPSEPPEWRAATDESGKGFVDILYDKAVGEGIAKITINRPDRRNAFRPLTVKEL 103
Query: 218 SKSLDDVGKNKSKGMILASSSPTV-FSAGLDIMEMYKPDLKRAETFWTA-LQDVWLKLYG 391
++ +D + S G+I+ + T F +G D ++F + D+ +++
Sbjct: 104 MRAFEDARDDSSIGVIILTGKGTQSFCSGGDQALRDADGYVDFDSFGRLNVLDLQVQIRR 163
Query: 392 SSFPTAAAINGHAPAGGCLFSLSCEYRVMAN 484
P A + G+A GG + + C+ + A+
Sbjct: 164 LPKPVIAMVAGYAVGGGHVLHMVCDLTIAAD 194
>01_01_0746 + 5772340-5773083
Length = 247
Score = 35.1 bits (77), Expect = 0.042
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = +2
Query: 257 GMILASSSPTVFSAGLDIMEMYKPDLKRAETFWTALQDVWLKLYGSSFPTAAAINGHAPA 436
G ++ + FS G D+ + + A + + L PT AA+ GHA A
Sbjct: 53 GALVIAGEGKYFSNGFDLDWARTVPAELHASMGGAFRGLVADLLALPVPTVAAVTGHAAA 112
Query: 437 GGCLFSLSCEYRVMANGKYSIGLNETALGI 526
GC +L+ + VM + + ++E G+
Sbjct: 113 AGCALALAHDAVVMRASRGFLYMSEVDAGL 142
>11_03_0046 - 9309754-9309820,9310414-9311132
Length = 261
Score = 31.9 bits (69), Expect = 0.39
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 146 EGIAVLTMQRPPVNS-LNLELLQDISKSLDDVGKNKSKGMILASSSPTVFSAGLDIMEMY 322
+GI VLTM + L E + D+ SL V ++ +S F G+D
Sbjct: 11 DGIFVLTMASSDGHQYLTDEAIGDLIASLTAVRDTPGLRGLVTTSRLGSFCDGVDHDAAR 70
Query: 323 KPDLKRAETFWTALQDVWLKLYGSSFPTAAAINGHAPAGGCLFSLSCEYRVMANG 487
+PD E + +V L PTAAA+NG A + G +L+ ++ V+ G
Sbjct: 71 QPD----EQVAARVGEVVRLLLEMPAPTAAAVNGDATSLGLALALAHDHCVVWEG 121
>03_01_0180 +
1456182-1456359,1456444-1456520,1456570-1456692,
1456783-1456896,1457580-1457666,1458040-1458179,
1458253-1458340,1459125-1459198,1461147-1461340,
1461430-1461632,1461955-1462001,1462084-1462336,
1462551-1462568
Length = 531
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 74 KSAVPNCRLMSAKAGPLVDLTVDNEGIAVLTMQRPPVNSLNLELLQDISKSLDDVGKNKS 253
KS ++ +GPL ++D E + ++TM+ L ++L + + +D K K
Sbjct: 386 KSEKKRDNILDFNSGPLPSYSLDQEAVGIITMEDVMEQLLQEDILDETDEYVDVHNKIKI 445
Query: 254 KGMILASS-SPTV 289
+ L S SPT+
Sbjct: 446 NMLPLGKSLSPTI 458
>04_03_0824 +
20086639-20087263,20087282-20087463,20087569-20087724,
20087867-20087989,20088079-20088247,20088384-20088466,
20088641-20088742,20089246-20089359,20089735-20089811,
20089884-20089962,20090060-20090128,20090235-20090410,
20090460-20090561,20090678-20090768,20090878-20090976,
20091141-20091326
Length = 810
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 266 LASSSPTVFSAGLDIMEMYKPDLKRAETFWTALQDVWLKLYGSSFPT 406
LA S+ G+ + + +KR +T WT+ +DVW + +FPT
Sbjct: 408 LADSAKNGVDVGISLTYENQSAMKREDTKWTSGRDVWWQDVVPNFPT 454
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 266 LASSSPTVFSAGLDIMEMYKPDLKRAETFWTALQDVWLKLYGSSFPT 406
LA S + GL + + +KR +T W A +DVW + +SFPT
Sbjct: 258 LAESEKQGVAVGLCLTYENQSAMKREDTKWQAGRDVWWQDVVTSFPT 304
>06_01_0303 +
2194345-2194414,2195228-2195328,2195818-2196657,
2196743-2196889,2196985-2197365
Length = 512
Score = 31.1 bits (67), Expect = 0.69
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 365 QDVWLKLYGSSFPTAAAINGHAPAGGCLFSLSCEYRVMANGKYSIGLNETALGIVAPRWF 544
+D+W +L S P AA + L S C + + + + GLN A G
Sbjct: 57 EDIW-RLIHSLMPMRAAARAACVSRSFLSSWRCHPNLNFSSE-AFGLNRNACGKEELAGL 114
Query: 545 MYSMVEHDLEQGSG 586
YS V+H L++ SG
Sbjct: 115 FYSKVDHILKRHSG 128
>03_05_0633 + 26276454-26277368
Length = 304
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 479 ANGKYSIGLNETALGIVAPRWFMYSMVEHDLEQGSG 586
A+G+ S T+L ++ PRW + S+V D ++G G
Sbjct: 232 ADGQGSPPTGGTSLPLLRPRWLLSSIVVEDRKRGGG 267
>08_02_0930 - 22704382-22705329
Length = 315
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 464 EYRVMANGKYSIGLNETALGIVAPRWFMYSMV 559
+Y ++ G ++ L T LG+ APR F S+V
Sbjct: 150 QYHLLLQGVVAVTLAATVLGVAAPRSFAVSLV 181
>11_06_0583 + 25213680-25213827,25213920-25214335
Length = 187
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 122 LVDLTVDNEGIAVLTMQRPPVNSLNLELLQDI 217
+VD DNE IA+ T+ PP S N ++L+ +
Sbjct: 122 IVDAAGDNEAIALSTVVMPPKISKNTKILRHV 153
>08_02_1284 -
25864049-25864202,25864690-25864880,25865053-25865895,
25865953-25866896,25867052-25867190,25867259-25867334,
25867666-25867788,25867869-25867952,25868145-25868235,
25868448-25868532,25868620-25868784,25868872-25868928,
25870141-25870302
Length = 1037
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 240 PTSSRDLLISWSNSKLRLLTGGRCIVSTAIPSLSTVKSTN-GPA-LADINLQLGTADLTL 67
P S D+ S S L + G + + + +PS ST STN P L I LT
Sbjct: 659 PNSKSDIATSMGASSLHVAGGRQLLKTDDVPSTSTSPSTNSNPVLLQSIPSSSKNQSLTT 718
Query: 66 LIK*RKGSIVL 34
K + S+VL
Sbjct: 719 AGKTSQSSVVL 729
>04_03_0150 + 11877714-11878487,11880928-11881245
Length = 363
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +2
Query: 401 PTAAAINGHAPAGGCLFSLSCEYRVMANGKYSIGLNETALGIVAPRWFMYSMVEHDLEQG 580
P + +P G C + + + G NE A+ +V PR + S + H+ + G
Sbjct: 11 PASQFNKSQSPRGACASTEPARTQAKRSRPTPAGGNEQAVAVVVPRRSLPSSINHNSKTG 70
Query: 581 S 583
+
Sbjct: 71 T 71
>03_05_0470 - 24647118-24647267,24647387-24647528,24649070-24650256
Length = 492
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 221 KSLDDVGKNKSKGMILASSSPTVFSAGLDIMEMYKPDLKRAETFWTALQDVWLKL 385
+SLD +G + +I A + F D E++ +R+ WTA+ +V+LKL
Sbjct: 108 RSLDSLGTFVANNLISAYAR---FDEVSDAREVFDEMPERSVVSWTAMMNVYLKL 159
>11_06_0594 + 25349612-25352530
Length = 972
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 392 SHIT*AIHLVMQSKTFLLALNLVCTFPLYQDPQKTL-*AMTKPRSFL*TYSFPH-HQGIC 219
S I I ++ K FL+ L+ VC+ L++D + +L + P + L T S P Q C
Sbjct: 284 SQIALMIQEQLEGKRFLIVLDDVCSESLWKDIEASLHCGNSAPSAILVTTSLPEVAQSFC 343
Query: 218 LY 213
Y
Sbjct: 344 PY 345
>06_01_0485 -
3444240-3444398,3444507-3444572,3444644-3444724,
3444823-3444900,3444980-3445075,3445363-3445405,
3445498-3445571,3445693-3445781,3445887-3445935,
3446171-3446227,3446309-3446425,3448633-3448698,
3449140-3449196,3449271-3449363,3449515-3449662,
3449753-3449902,3449979-3450181,3450319-3450438,
3450530-3450694,3450784-3450870,3450951-3451100,
3451225-3451365,3451399-3451569,3452015-3452091,
3452175-3452415,3452495-3452758,3452913-3453000,
3453099-3453481
Length = 1170
Score = 27.5 bits (58), Expect = 8.5
Identities = 29/104 (27%), Positives = 49/104 (47%)
Frame = +2
Query: 275 SSPTVFSAGLDIMEMYKPDLKRAETFWTALQDVWLKLYGSSFPTAAAINGHAPAGGCLFS 454
+SPT+F+AG +P L + F ++D ++ + A I+ AGG S
Sbjct: 232 ASPTLFNAGTP-----RPQL--SSCFLICMKDDSIEGIYDTLKECAVIS--KSAGGIGVS 282
Query: 455 LSCEYRVMANGKYSIGLNETALGIVAPRWFMYSMVEHDLEQGSG 586
+ + + A G Y G N T+ GIV P +++ ++QG G
Sbjct: 283 V---HNIRATGSYIRGTNGTSNGIV-PMLRVFNDTARYVDQGGG 322
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,040
Number of Sequences: 37544
Number of extensions: 318380
Number of successful extensions: 717
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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