Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H21
(241 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6N9X3 Cluster: Cytochrome c oxidase polyprotein IV; n=... 60 7e-09
UniRef50_P13073 Cluster: Cytochrome c oxidase subunit 4 isoform ... 55 3e-07
UniRef50_O46584 Cluster: Cytochrome c oxidase subunit 4 isoform ... 55 3e-07
UniRef50_O46582 Cluster: Cytochrome c oxidase subunit 4 isoform ... 55 4e-07
UniRef50_P80971 Cluster: Cytochrome c oxidase subunit 4 isoform ... 53 1e-06
UniRef50_Q71SZ7 Cluster: Cytochrome c oxidase subunit IV; n=5; T... 53 1e-06
UniRef50_Q9VIQ8 Cluster: CG10664-PA, isoform A; n=12; Endopteryg... 53 1e-06
UniRef50_Q96KJ9 Cluster: Cytochrome c oxidase subunit 4 isoform ... 53 1e-06
UniRef50_Q6PH92 Cluster: MGC68573 protein; n=4; Xenopus|Rep: MGC... 50 1e-05
UniRef50_UPI000069ED0B Cluster: Cytochrome c oxidase subunit 4 i... 48 4e-05
UniRef50_Q6PBK2 Cluster: LOC402880 protein; n=4; Danio rerio|Rep... 48 5e-05
UniRef50_Q0PWT8 Cluster: Cytochrome c oxidase polypeptide IV-lik... 45 3e-04
UniRef50_Q8T4H8 Cluster: AT07685p; n=2; melanogaster subgroup|Re... 44 7e-04
UniRef50_Q27123 Cluster: Cytochrome c oxidase subunit IV; n=2; P... 40 0.014
UniRef50_UPI0000589031 Cluster: PREDICTED: similar to cytochrome... 38 0.033
UniRef50_Q07XP4 Cluster: Response regulator receiver modulated d... 31 6.5
>UniRef50_A6N9X3 Cluster: Cytochrome c oxidase polyprotein IV; n=1;
Ornithodoros parkeri|Rep: Cytochrome c oxidase
polyprotein IV - Ornithodoros parkeri
Length = 180
Score = 60.5 bits (140), Expect = 7e-09
Identities = 22/28 (78%), Positives = 28/28 (100%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+RM+DL+VNP+DG++SKWDYENNRWK
Sbjct: 152 QLQRMIDLRVNPIDGIASKWDYENNRWK 179
>UniRef50_P13073 Cluster: Cytochrome c oxidase subunit 4 isoform 1,
mitochondrial precursor; n=28; Euteleostomi|Rep:
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
precursor - Homo sapiens (Human)
Length = 169
Score = 55.2 bits (127), Expect = 3e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>UniRef50_O46584 Cluster: Cytochrome c oxidase subunit 4 isoform 1;
n=7; Eutheria|Rep: Cytochrome c oxidase subunit 4
isoform 1 - Aotus azarai (Southern owl monkey) (Aotus
azarae)
Length = 144
Score = 55.2 bits (127), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLDLKVNPVDGL+SKWDY+ WK
Sbjct: 116 QTKRMLDLKVNPVDGLASKWDYDKKEWK 143
>UniRef50_O46582 Cluster: Cytochrome c oxidase subunit 4 isoform 1;
n=3; Cebidae|Rep: Cytochrome c oxidase subunit 4 isoform
1 - Saimiri sciureus (Common squirrel monkey)
Length = 124
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLDLK+NP+DGL+SKWDYE WK
Sbjct: 96 QTKRMLDLKMNPIDGLASKWDYEKKEWK 123
>UniRef50_P80971 Cluster: Cytochrome c oxidase subunit 4 isoform 2,
mitochondrial precursor; n=7; Clupeocephala|Rep:
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial
precursor - Thunnus obesus (Bigeye tuna)
Length = 176
Score = 53.2 bits (122), Expect = 1e-06
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QLKRMLD++VNP++G S+KWDYE +WK
Sbjct: 149 QLKRMLDMRVNPIEGFSAKWDYEKGQWK 176
>UniRef50_Q71SZ7 Cluster: Cytochrome c oxidase subunit IV; n=5;
Tetrapoda|Rep: Cytochrome c oxidase subunit IV -
Meleagris gallopavo (Common turkey)
Length = 171
Score = 52.8 bits (121), Expect = 1e-06
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+++NPV G+SS+WDYE N WK
Sbjct: 143 QTKRMLDMRINPVQGISSQWDYEKNEWK 170
>UniRef50_Q9VIQ8 Cluster: CG10664-PA, isoform A; n=12;
Endopterygota|Rep: CG10664-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 182
Score = 52.8 bits (121), Expect = 1e-06
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+R++DL++NPV GL+SKWDYEN +WK
Sbjct: 154 QLQRIIDLEINPVTGLTSKWDYENKKWK 181
>UniRef50_Q96KJ9 Cluster: Cytochrome c oxidase subunit 4 isoform 2,
mitochondrial precursor; n=12; Theria|Rep: Cytochrome c
oxidase subunit 4 isoform 2, mitochondrial precursor -
Homo sapiens (Human)
Length = 171
Score = 52.8 bits (121), Expect = 1e-06
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+RMLD+KVNPV GL+S+WDYE +WK
Sbjct: 143 QLQRMLDMKVNPVQGLASRWDYEKKQWK 170
>UniRef50_Q6PH92 Cluster: MGC68573 protein; n=4; Xenopus|Rep:
MGC68573 protein - Xenopus laevis (African clawed frog)
Length = 174
Score = 50.0 bits (114), Expect = 1e-05
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q +RMLD+K++P+ G +SKWDYE N WK
Sbjct: 146 QARRMLDMKISPIQGFASKWDYEKNEWK 173
>UniRef50_UPI000069ED0B Cluster: Cytochrome c oxidase subunit 4
isoform 2, mitochondrial precursor (EC 1.9.3.1)
(Cytochrome c oxidase subunit IV isoform 2) (COX IV-2).;
n=2; Tetrapoda|Rep: Cytochrome c oxidase subunit 4
isoform 2, mitochondrial precursor (EC 1.9.3.1)
(Cytochrome c oxidase subunit IV isoform 2) (COX IV-2).
- Xenopus tropicalis
Length = 169
Score = 48.0 bits (109), Expect = 4e-05
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRM+D+++NPV G SS WDYE +WK
Sbjct: 142 QAKRMIDMRINPVTGFSSHWDYEKKQWK 169
>UniRef50_Q6PBK2 Cluster: LOC402880 protein; n=4; Danio rerio|Rep:
LOC402880 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 171
Score = 47.6 bits (108), Expect = 5e-05
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q +RMLD+KVNP+ G + KWDYE +WK
Sbjct: 144 QTQRMLDMKVNPITGFAHKWDYEKKQWK 171
>UniRef50_Q0PWT8 Cluster: Cytochrome c oxidase polypeptide IV-like
protein; n=1; Diaphorina citri|Rep: Cytochrome c oxidase
polypeptide IV-like protein - Diaphorina citri (Asian
citrus psyllid)
Length = 155
Score = 45.2 bits (102), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 6 LKRMLDLKVNPVDGLSSKWDYENNRWK 86
L++M+DL+ NP+ G +SKWDYE N WK
Sbjct: 128 LQKMIDLRWNPITGTASKWDYEKNDWK 154
>UniRef50_Q8T4H8 Cluster: AT07685p; n=2; melanogaster subgroup|Rep:
AT07685p - Drosophila melanogaster (Fruit fly)
Length = 176
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+R++ L++NP+ GL+SKW Y N+WK
Sbjct: 149 QLRRIIQLQMNPITGLASKWCYRENKWK 176
>UniRef50_Q27123 Cluster: Cytochrome c oxidase subunit IV; n=2;
Protostomia|Rep: Cytochrome c oxidase subunit IV -
Urechis caupo (Innkeeper worm) (Spoonworm)
Length = 186
Score = 39.5 bits (88), Expect = 0.014
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 6 LKRMLDLKVNPVDGLSSKWDYENNRWK 86
LK M+ P+ G++SK+DYENNRWK
Sbjct: 160 LKMMVKQNQGPITGVASKYDYENNRWK 186
>UniRef50_UPI0000589031 Cluster: PREDICTED: similar to cytochrome c
oxidase subunit IV precursor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome c
oxidase subunit IV precursor - Strongylocentrotus
purpuratus
Length = 162
Score = 38.3 bits (85), Expect = 0.033
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+ + ++ PV G++S+WDYE N WK
Sbjct: 134 QLRYQIAIRNGPVTGIASQWDYEKNEWK 161
>UniRef50_Q07XP4 Cluster: Response regulator receiver modulated
diguanylate cyclase/phosphodiesterase with PAS/PAC
sensor; n=1; Shewanella frigidimarina NCIMB 400|Rep:
Response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor -
Shewanella frigidimarina (strain NCIMB 400)
Length = 829
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 161 FLHDVRGRSHGRDLTSTAAFRYNSLLPAIVLVVPLGGE 48
FL+D G +G +L A R SL+PA + LGG+
Sbjct: 437 FLNDSLGHQYGDELICMMARRLRSLIPASYTLARLGGD 474
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,603,261
Number of Sequences: 1657284
Number of extensions: 3966199
Number of successful extensions: 11017
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11016
length of database: 575,637,011
effective HSP length: 58
effective length of database: 479,514,539
effective search space used: 10069805319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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