Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H21
         (241 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   1.5  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   2.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    20   2.3  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   2.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    22   3.4  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   3.4  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            21   6.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    21   7.9  

>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 17   AGPQGEPGGRAL 52
            AGP+G+PG RA+
Sbjct: 1253 AGPRGQPGHRAV 1264


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 42  DGLSSKWDYENNRWK*TIISKSCS*G*VATVAPPAHV 152
           D L  K  Y+NN W   ++ + C  G + +     H+
Sbjct: 116 DFLHIKEKYDNNWWIGRLVKEGCEVGFIPSPVKLEHI 152


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 20.2 bits (40), Expect(2) = 2.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 8   QAHAGPQGEPG 40
           +  +GP+GEPG
Sbjct: 376 KGQSGPKGEPG 386



 Score = 20.2 bits (40), Expect(2) = 2.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 17  AGPQGEPGG 43
           AGP G PGG
Sbjct: 397 AGPAGAPGG 405


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 140 RSHGRDLTSTAAF---RYNSLLPAIVLVVPLGGEPVHRVH 30
           +S  R L +  AF   RYN+ + A VLV+    +  +RVH
Sbjct: 747 KSSWRRLLADVAFSRLRYNAAIWAHVLVLKENRQLANRVH 786


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
          chain protein.
          Length = 1024

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 5  AQAHAGPQGEPG 40
          AQ +AGP G PG
Sbjct: 40 AQGNAGPPGAPG 51


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 121 RSRPWLRPRTSC 156
           R R W RP TSC
Sbjct: 22  RGRRWPRPPTSC 33


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 34  TRWTGSPPSGTTRTIAG 84
           T+W GSP +G  R   G
Sbjct: 157 TQWNGSPNTGMYRGKCG 173


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 222 VGITFIILQIFY 187
           VGITF+ + +FY
Sbjct: 257 VGITFLTVLVFY 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,266
Number of Sequences: 2352
Number of extensions: 4382
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)