Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H21
(241 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase sub... 55 3e-08
U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subu... 55 3e-08
M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein. 55 3e-08
M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subu... 55 3e-08
BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase su... 55 3e-08
BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase su... 55 3e-08
BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase su... 55 3e-08
BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase su... 55 3e-08
AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase su... 55 3e-08
AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase su... 55 3e-08
AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase su... 55 3e-08
BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase su... 53 2e-07
AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase su... 53 2e-07
AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase su... 52 4e-07
>X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase
subunit IV protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subunit
IV protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subunit
IV precursor protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase
subunit IV protein.
Length = 144
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 116 QTKRMLDMKVNPIQGLASKWDYEKNEWK 143
>AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 55.2 bits (127), Expect = 3e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
Q KRMLD+KVNP+ GL+SKWDYE N WK
Sbjct: 141 QTKRMLDMKVNPIQGLASKWDYEKNEWK 168
>BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+RMLD+KVNPV GL+S+WDYE +WK
Sbjct: 143 QLQRMLDMKVNPVQGLASRWDYEKKQWK 170
>AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+RMLD+KVNPV GL+S+WDYE +WK
Sbjct: 143 QLQRMLDMKVNPVQGLASRWDYEKKQWK 170
>AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 precursor protein.
Length = 171
Score = 51.6 bits (118), Expect = 4e-07
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
QL+RMLD+KVNPV GL+S WDYE +WK
Sbjct: 143 QLQRMLDMKVNPVQGLASHWDYEKKQWK 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,028,286
Number of Sequences: 237096
Number of extensions: 580280
Number of successful extensions: 1671
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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