BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0003_H21 (241 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82077-6|CAB63334.1| 175|Caenorhabditis elegans Hypothetical pr... 27 1.8 Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 27 1.8 Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 27 1.8 Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 27 1.8 Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 27 1.8 AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 27 1.8 AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 27 1.8 AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical ... 27 2.3 AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical ... 27 2.3 Z70782-5|CAA94843.1| 322|Caenorhabditis elegans Hypothetical pr... 25 5.4 Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 25 5.4 AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 25 5.4 >Z82077-6|CAB63334.1| 175|Caenorhabditis elegans Hypothetical protein W09C5.8 protein. Length = 175 Score = 27.1 bits (57), Expect = 1.8 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 3 QLKRMLDLKVNPVDGLSSKWDYENNRWK 86 Q++R L L+ G + +DYEN +WK Sbjct: 148 QVERALVLEKGQFLGAPTHYDYENKKWK 175 >Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein T06D8.1b protein. Length = 3653 Score = 27.1 bits (57), Expect = 1.8 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 37 RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180 RW + S T++ + LL L A+ V ++P P+T +C + ++ Y+ Sbjct: 4 RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52 >Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein T06D8.1a protein. Length = 3719 Score = 27.1 bits (57), Expect = 1.8 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 37 RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180 RW + S T++ + LL L A+ V ++P P+T +C + ++ Y+ Sbjct: 4 RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52 >Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical protein T06D8.1b protein. Length = 3653 Score = 27.1 bits (57), Expect = 1.8 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 37 RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180 RW + S T++ + LL L A+ V ++P P+T +C + ++ Y+ Sbjct: 4 RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52 >Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein T06D8.1a protein. Length = 3719 Score = 27.1 bits (57), Expect = 1.8 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 37 RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180 RW + S T++ + LL L A+ V ++P P+T +C + ++ Y+ Sbjct: 4 RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52 >AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical protein T06D8.1b protein. Length = 3653 Score = 27.1 bits (57), Expect = 1.8 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 37 RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180 RW + S T++ + LL L A+ V ++P P+T +C + ++ Y+ Sbjct: 4 RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52 >AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical protein T06D8.1a protein. Length = 3719 Score = 27.1 bits (57), Expect = 1.8 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 37 RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180 RW + S T++ + LL L A+ V ++P P+T +C + ++ Y+ Sbjct: 4 RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52 >AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical protein Y59H11AL.1b protein. Length = 434 Score = 26.6 bits (56), Expect = 2.3 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = -1 Query: 217 NHIYYLTDILLILCNKTIDFYMTCAGGATVAT*PQLQLLDIIVYFQRL 74 NHIY+LT + +LC C V L +L +IVYF+RL Sbjct: 40 NHIYHLTPSMKMLCILFYSILCVCCVYGNV-----LVIL-VIVYFKRL 81 >AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical protein Y59H11AL.1a protein. Length = 427 Score = 26.6 bits (56), Expect = 2.3 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = -1 Query: 217 NHIYYLTDILLILCNKTIDFYMTCAGGATVAT*PQLQLLDIIVYFQRL 74 NHIY+LT + +LC C V L +L +IVYF+RL Sbjct: 40 NHIYHLTPSMKMLCILFYSILCVCCVYGNV-----LVIL-VIVYFKRL 81 >Z70782-5|CAA94843.1| 322|Caenorhabditis elegans Hypothetical protein R04B5.7 protein. Length = 322 Score = 25.4 bits (53), Expect = 5.4 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +2 Query: 104 KLQLRLGRDRGSARARHVEINCFIT 178 K R+G+D G R VE+NC T Sbjct: 61 KFPERIGKDNGCLFRRTVEVNCVRT 85 >Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein T08A11.1 protein. Length = 1872 Score = 25.4 bits (53), Expect = 5.4 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -3 Query: 233 FFFWLESHLLSYRY 192 FF+W +HLLS RY Sbjct: 1808 FFYWAWNHLLSNRY 1821 >AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical protein T08A11.1 protein. Length = 1872 Score = 25.4 bits (53), Expect = 5.4 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -3 Query: 233 FFFWLESHLLSYRY 192 FF+W +HLLS RY Sbjct: 1808 FFYWAWNHLLSNRY 1821 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,559,839 Number of Sequences: 27780 Number of extensions: 93069 Number of successful extensions: 246 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 240 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 246 length of database: 12,740,198 effective HSP length: 59 effective length of database: 11,101,178 effective search space used: 222023560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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