Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H21
         (241 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p...    27   1.8  
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr...    27   1.8  
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ...    27   1.8  
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ...    27   1.8  
AC024840-2|AAX55682.1|  434|Caenorhabditis elegans Hypothetical ...    27   2.3  
AC024840-1|AAF59619.2|  427|Caenorhabditis elegans Hypothetical ...    27   2.3  
Z70782-5|CAA94843.1|  322|Caenorhabditis elegans Hypothetical pr...    25   5.4  
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    25   5.4  
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    25   5.4  

>Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical
           protein W09C5.8 protein.
          Length = 175

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 3   QLKRMLDLKVNPVDGLSSKWDYENNRWK 86
           Q++R L L+     G  + +DYEN +WK
Sbjct: 148 QVERALVLEKGQFLGAPTHYDYENKKWK 175


>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 37  RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180
           RW  +  S T++ +    LL L A+  V ++P   P+T +C + ++ Y+
Sbjct: 4   RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52


>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 37  RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180
           RW  +  S T++ +    LL L A+  V ++P   P+T +C + ++ Y+
Sbjct: 4   RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52


>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 37  RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180
           RW  +  S T++ +    LL L A+  V ++P   P+T +C + ++ Y+
Sbjct: 4   RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52


>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 37  RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180
           RW  +  S T++ +    LL L A+  V ++P   P+T +C + ++ Y+
Sbjct: 4   RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52


>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 37  RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180
           RW  +  S T++ +    LL L A+  V ++P   P+T +C + ++ Y+
Sbjct: 4   RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52


>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 37  RWTGSPPSGTTRTIAGSKLLYLKAAVEVRSRPWLRPRT-SCRNQLFYYI 180
           RW  +  S T++ +    LL L A+  V ++P   P+T +C + ++ Y+
Sbjct: 4   RWWHNSSSQTSQFLIFIPLLTLLASSSVNAKPLNLPQTITCADNIYVYV 52


>AC024840-2|AAX55682.1|  434|Caenorhabditis elegans Hypothetical
           protein Y59H11AL.1b protein.
          Length = 434

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -1

Query: 217 NHIYYLTDILLILCNKTIDFYMTCAGGATVAT*PQLQLLDIIVYFQRL 74
           NHIY+LT  + +LC         C     V     L +L +IVYF+RL
Sbjct: 40  NHIYHLTPSMKMLCILFYSILCVCCVYGNV-----LVIL-VIVYFKRL 81


>AC024840-1|AAF59619.2|  427|Caenorhabditis elegans Hypothetical
           protein Y59H11AL.1a protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -1

Query: 217 NHIYYLTDILLILCNKTIDFYMTCAGGATVAT*PQLQLLDIIVYFQRL 74
           NHIY+LT  + +LC         C     V     L +L +IVYF+RL
Sbjct: 40  NHIYHLTPSMKMLCILFYSILCVCCVYGNV-----LVIL-VIVYFKRL 81


>Z70782-5|CAA94843.1|  322|Caenorhabditis elegans Hypothetical
           protein R04B5.7 protein.
          Length = 322

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 104 KLQLRLGRDRGSARARHVEINCFIT 178
           K   R+G+D G    R VE+NC  T
Sbjct: 61  KFPERIGKDNGCLFRRTVEVNCVRT 85


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 233  FFFWLESHLLSYRY 192
            FF+W  +HLLS RY
Sbjct: 1808 FFYWAWNHLLSNRY 1821


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 233  FFFWLESHLLSYRY 192
            FF+W  +HLLS RY
Sbjct: 1808 FFYWAWNHLLSNRY 1821


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,559,839
Number of Sequences: 27780
Number of extensions: 93069
Number of successful extensions: 246
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 59
effective length of database: 11,101,178
effective search space used: 222023560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)