Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H21
         (241 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   1.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   2.8  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          20   4.9  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         19   8.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    19   8.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    19   8.5  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 92  SLLPAIVLVVPLGGEPVHRVH 30
           +LL   V   P+ GEP  RVH
Sbjct: 40  ALLNFFVATSPVIGEPCQRVH 60


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 222 VGITFIILQIFY 187
           VGITF+ + +FY
Sbjct: 261 VGITFLTVLVFY 272


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 121 RSRPWLRPRTSCR 159
           R R W RPR S +
Sbjct: 43  RKRSWSRPRESAQ 55


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 48 LSSKWDYENN 77
          LS ++DY+NN
Sbjct: 55 LSGEYDYKNN 64


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
          protein MRJP1 protein.
          Length = 432

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 48 LSSKWDYENN 77
          LS ++DY+NN
Sbjct: 55 LSGEYDYKNN 64


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
          protein MRJP1 protein.
          Length = 432

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 48 LSSKWDYENN 77
          LS ++DY+NN
Sbjct: 55 LSGEYDYKNN 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,536
Number of Sequences: 438
Number of extensions: 910
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)