Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H20
         (472 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.7  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 199 GTYVSRHPDSSRRG*NRTGYPHP 131
           GTY  R PD +  G    GY  P
Sbjct: 362 GTYAFRTPDENGEGGAWVGYEDP 384


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 190 VSRHPDSSRRG*NRTGYPHPSIVV 119
           VS HPDS     + T  P P + V
Sbjct: 214 VSEHPDSPNSKKSATPSPPPQLEV 237


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 211  ERNVRVRQVDPLISSMNQGDCFILD 285
            E+N++V +   LI  ++  DC  +D
Sbjct: 1385 EKNLQVNESGKLIHKIDAQDCDFVD 1409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,906
Number of Sequences: 336
Number of extensions: 2603
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)