Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H20
(472 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 100 5e-22
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 97 8e-21
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 95 3e-20
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 71 5e-13
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 61 5e-10
12_02_0727 - 22564183-22564815,22564906-22565073,22565264-225653... 30 1.1
03_02_0778 - 11123820-11124242,11125196-11125201 30 1.1
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449... 30 1.1
05_05_0160 + 22829401-22830658,22831671-22831703,22832586-22832728 29 2.5
08_01_1077 - 11027732-11027839,11028346-11028477,11029722-110298... 28 3.3
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 28 3.3
06_01_0906 + 6990892-6991615,6992480-6992679,6992822-6993002,699... 28 4.4
05_01_0258 + 1984666-1984878,1985019-1985852 28 4.4
02_02_0545 - 11376016-11378307 28 4.4
12_01_0056 + 482987-483019,483153-483362,483503-483604,484601-48... 27 5.8
07_03_1106 + 24017601-24019955 27 5.8
01_01_1040 - 8203087-8203631,8205489-8205524,8205731-8205869 27 5.8
12_02_0689 + 22160627-22160720,22161331-22161425,22161679-221618... 27 7.6
11_06_0618 + 25565780-25566064,25566855-25567046,25567144-255674... 27 7.6
06_03_0460 + 21024729-21025102,21025599-21025917 27 7.6
02_05_0405 + 28708077-28708391,28708478-28708573,28709030-287094... 27 7.6
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 100 bits (240), Expect = 5e-22
Identities = 55/130 (42%), Positives = 73/130 (56%)
Frame = +1
Query: 1 AGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPG 180
AG AAI TV LD GG AVQHRE G+ES+ FL YF + L+GG SGF
Sbjct: 82 AGTAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLEGGFASGFK-TPEEDK 140
Query: 181 AEKRMFQVKGERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMA 360
E R++ KG+R +RV++V SS+N D FILD IY + G + E+ KA+
Sbjct: 141 FETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEAI 200
Query: 361 NQIRDQDHNG 390
+++ HNG
Sbjct: 201 QHLKETYHNG 210
Score = 31.1 bits (67), Expect = 0.47
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 250 SSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQ--IRDQDHNGRGRV-ELLAHY 420
S + CF++D D++++VG T+ VE+ KA S A + I Q+ RV ++ Y
Sbjct: 278 SILENNKCFLVDCGSDLFIWVGRLTQ-VEERKAASAAVEEFIATQNRPKTTRVTRVIQGY 336
Query: 421 SNEVDTLKF 447
N KF
Sbjct: 337 ENHTFKSKF 345
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 96.7 bits (230), Expect = 8e-21
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +1
Query: 1 AGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPG 180
AG AAI TV LD GG AVQ+RE G+E+ FL YF + +GG SGF H N
Sbjct: 135 AGTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINER 194
Query: 181 AE-KRMFQVKGERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISM 357
R+F +G+ V V++V SS+N D FILD I+ + G + E+ KA+ +
Sbjct: 195 EHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEV 254
Query: 358 ANQIRDQDHNGR 393
++D +H G+
Sbjct: 255 VQYLKDSNHEGK 266
Score = 34.3 bits (75), Expect = 0.050
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Frame = +1
Query: 55 AVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGAEK--------RMFQVKG 210
AV R G E F F + L GG +G+ V+ G E +F+V+G
Sbjct: 527 AVMVRLYEGKEPAEFFSIFQN-LVIFKGGVSTGYKKFVSENGIEDDTYSENGVALFRVQG 585
Query: 211 E--RNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEK 339
N++ QVD +S+N C++L ++ ++G + ++++
Sbjct: 586 SGPENMQAIQVDTAATSLNSSYCYVLHDGDTLFTWIGNLSSSMDQ 630
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 268 DCFILDIHYDIYVYVGERTKNVEKLKAISMANQIRDQD 381
D FILD H ++V+VG+R + +A+S+ + + D
Sbjct: 710 DVFILDCHSCVFVWVGQRVDTKMRAQALSVGEKFLELD 747
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 271 CFILDIHYDIYVYVGERTKNVEKLKAISMANQ-IRDQDHNGRGRVELLAHYSNEVDTLKF 447
C++LD +IYV++G T E+ +A S A + +R+ + V L+ + + KF
Sbjct: 341 CYLLDCGSEIYVWMGRETPLEERKRAGSAAEELLREVNRPKSHIVRLMEGFETVIFRSKF 400
Query: 448 LHSPR 462
P+
Sbjct: 401 SKWPK 405
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 94.7 bits (225), Expect = 3e-20
Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +1
Query: 1 AGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPG 180
AG AAILTV LD GG AVQ+RE G E+ L YF + GG SGFNHV N
Sbjct: 96 AGTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQ 155
Query: 181 AE-KRMFQVKGERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISM 357
R++ +G+ V V++V + SS+N D FILD I+ + G + E+ KA+ +
Sbjct: 156 DHVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEV 215
Query: 358 ANQIRDQDHNGRGRV 402
I+D H G+ V
Sbjct: 216 VQYIKDTFHEGKCEV 230
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +1
Query: 43 FGGAAVQHREAMGHESNHFLQYFT--SALQYLDGGNPSGFNHVVTNPGAEK--------R 192
F A Q +A +E +Q+F +LQ GG SG+ + + G +
Sbjct: 476 FQAAKFQAAQARLYEGKEPIQFFVIFQSLQVFKGGLSSGYKNFIAVNGTDDDTYVEGGLA 535
Query: 193 MFQVKGE--RNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVE 336
+F+++G N++ QVD + SS+N C+IL ++ + G T +++
Sbjct: 536 LFRIQGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVFTWTGNLTTSLD 585
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 70.9 bits (166), Expect = 5e-13
Identities = 48/134 (35%), Positives = 64/134 (47%)
Frame = +1
Query: 1 AGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPG 180
+G AAILTV LD GG AVQ+RE G+E++ FL YF + GG SGF HV
Sbjct: 109 SGTAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHV----- 163
Query: 181 AEKRMFQVKGERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMA 360
+V SS+N D FILD I+ + G + E+ KA+ +
Sbjct: 164 -----------------EVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVV 206
Query: 361 NQIRDQDHNGRGRV 402
I+D H G+ V
Sbjct: 207 QYIKDTFHEGKCEV 220
Score = 35.1 bits (77), Expect = 0.029
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Frame = +1
Query: 55 AVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGAEK--------RMFQVKG 210
AVQ R G E F F S Q GG SG+ + G + +F+++G
Sbjct: 479 AVQTRLYEGKEPIQFFVIFQS-FQVFKGGLSSGYKKFIAENGIDDDTYLEDGLALFRIQG 537
Query: 211 E--RNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEK 339
N++ QVD SS+N +IL ++ + G T ++++
Sbjct: 538 SGPENMQAIQVDAAASSLNSSYSYILHDGNTVFTWTGNLTTSLDQ 582
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 211 ERNVRVRQVDPLISS-MNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQ 366
E N++++++ + D FILD H DI+V+VG++ +L+A+ + +
Sbjct: 632 EGNLKIKEIYHFTQDDLMTEDVFILDCHSDIFVWVGQQVDVKVRLQALDIGEK 684
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 60.9 bits (141), Expect = 5e-10
Identities = 34/123 (27%), Positives = 60/123 (48%)
Frame = +1
Query: 25 VGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGAEKRMFQV 204
+ LD G VQ+RE G ES+ FL YF + + G + S + + + MF+
Sbjct: 82 IELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG-SLSSHMRIYGDKSKDTTMFRC 140
Query: 205 KGERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQIRDQDH 384
+GE RV +V SS++ F++D I+++ G + + KA+ + +++ H
Sbjct: 141 EGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNSSMQTRAKALDVVKHLKENRH 200
Query: 385 NGR 393
GR
Sbjct: 201 CGR 203
>12_02_0727 -
22564183-22564815,22564906-22565073,22565264-22565382,
22565796-22565898,22566702-22566974,22567088-22567279,
22568289-22568615
Length = 604
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 254 DDISGSTCLTRTFLSPLTWNIRFSAPGFVTTWLKPDGLPPS 132
+ +S STCL + +TW++ S F+TT + + L PS
Sbjct: 286 EKLSSSTCLAFGPAACMTWDLAESGKDFITTIVNRNDLVPS 326
>03_02_0778 - 11123820-11124242,11125196-11125201
Length = 142
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +3
Query: 93 PLPTVLHICTTILGWG*PVRFQPRRDESGCRETYVPG*RREECS 224
PLP H T WG P QPRR + + PG RREE +
Sbjct: 101 PLP---HPMRTTSPWGAPTSAQPRRHHASPCGSVGPGGRREEAA 141
>03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,
4498179-4499263,4499351-4500296
Length = 1264
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 274 SSRLDSWTISVGLPVSLEHSSRL*PGTYVSRHPDSSRRG*NRTGY 140
S+ SW+ S G P L+HSS+L G+ + P S+R ++ +
Sbjct: 1059 STPKQSWSFS-GTPSELKHSSKLENGSDIEARPPSARNNHEKSSW 1102
>05_05_0160 + 22829401-22830658,22831671-22831703,22832586-22832728
Length = 477
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 203 TWNIRFSAPGFVTTWLKPDGLPPSKYCSADVK 108
TW RF PGF+T + DG PP +Y A+++
Sbjct: 173 TW--RFVKPGFLTQADRGDG-PPDRYAVAEIR 201
>08_01_1077 -
11027732-11027839,11028346-11028477,11029722-11029802,
11029911-11030063,11030167-11030281,11030282-11030927,
11031409-11031613,11031696-11031758
Length = 500
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 337 KLKAISMANQIRDQDHNGRGRVELLAHYSNEVDTLK 444
+LK +++ ++ QDHNG + L+ S + LK
Sbjct: 385 ELKELTLKLEVERQDHNGEDEIRLMVGRSFSAENLK 420
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 202 VKGERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLK 345
++GE R +QV+ L + +NQ C I+D ++ ER KN+E+ K
Sbjct: 474 LQGEIAKRDQQVETLENQVNQL-CSIIDEKEQLHTCAVEREKNLEEQK 520
>06_01_0906 +
6990892-6991615,6992480-6992679,6992822-6993002,
6993855-6994046,6994492-6994724,6995537-6995638,
6995776-6995826,6996234-6996338,6997287-6997353,
6997946-6997962
Length = 623
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 91 NHFLQYFTSALQYLDGGNPSGFN-HVVTNPGAEKRMFQVKGERNVRVRQVDP 243
NHF+Q + + +Y G G + NP K M ++ VRVR+V+P
Sbjct: 355 NHFIQDYEKSGEYT-GFPILGIEWQKMENPDLRKAMGMKSDQKGVRVRRVEP 405
>05_01_0258 + 1984666-1984878,1985019-1985852
Length = 348
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 307 YVGERTKNVEKLKAISMANQIRDQDHNGRGRVELLAH 417
Y + K+VEK+ + N I+D G G V LL H
Sbjct: 30 YYEKTCKDVEKIVNSIVVNSIKDNRGKGAGLVRLLFH 66
>02_02_0545 - 11376016-11378307
Length = 763
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 339 FLYVLSSFAHINVYVVMYVKDEAVALIHGRYQWVYLS 229
FL+VL+S I Y + +K A L++ Q +Y+S
Sbjct: 104 FLFVLASSDSITAYTLADIKSPATVLLNRGLQVIYVS 140
>12_01_0056 +
482987-483019,483153-483362,483503-483604,484601-484700,
484775-484866,484962-485738
Length = 437
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 149 DGLPPSKYCSADVKYCRKWLLSWPIASRCCTAAPPNL 39
D LPP+ S ++ CRKW L W ++ T P +
Sbjct: 364 DALPPAVQKSV-LEECRKWNLVWVGKNKVATLEPDEM 399
>07_03_1106 + 24017601-24019955
Length = 784
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 214 RNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAIS 354
R R Q + L + M + DC + Y ++ K ++K+KA+S
Sbjct: 500 RGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 546
>01_01_1040 - 8203087-8203631,8205489-8205524,8205731-8205869
Length = 239
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 145 PSGFNHVVTNPGAEKRMFQVKGERNVR-VRQVDPLIS-SMNQGDCFI 279
P G N T+P A + +F + GE +V V + L+S +++QGD F+
Sbjct: 121 PGGLNPPHTHPRATEVVFVLYGELDVGFVTTANKLLSRTISQGDVFV 167
>12_02_0689 +
22160627-22160720,22161331-22161425,22161679-22161822,
22162256-22162513,22162595-22162666,22162759-22162824,
22163212-22163346,22163562-22163697,22163807-22163983,
22164086-22164192,22164281-22164421,22164604-22164740,
22164823-22165076,22165158-22165300,22165423-22165581,
22166049-22166461,22167369-22167474
Length = 878
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 157 NHVVTNPGAEKRMFQVKGERNVRVRQ 234
NHVV N E + FQ++ + N V+Q
Sbjct: 259 NHVVVNGDGEVKQFQLEAQTNFDVQQ 284
>11_06_0618 +
25565780-25566064,25566855-25567046,25567144-25567416,
25567636-25567738,25568273-25568391,25568615-25568782,
25568908-25569386,25569742-25569850,25569905-25570070,
25571405-25571433
Length = 640
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 248 ISGSTCLTRTFLSPLTWNIRFSAPGFVTTWLKPDGLPPS 132
+S S+C+ + +TW++ S FVTT + + L PS
Sbjct: 274 LSSSSCIAFGPAACMTWDLAESGKEFVTTVVNRNDLVPS 312
>06_03_0460 + 21024729-21025102,21025599-21025917
Length = 230
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 245 SGSTCLTRTFLSPLTWNIRFSAPGFVTTWLKPDGLPPSKYCS 120
SG + T T SP + ++ G VT+W DG YCS
Sbjct: 33 SGDSSATTTLRSPASSSLTDDG-GEVTSWTSADGGGGGDYCS 73
>02_05_0405 +
28708077-28708391,28708478-28708573,28709030-28709450,
28710051-28710141,28710483-28710819,28710905-28711053,
28711782-28712295
Length = 640
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 136 GGNPSGFNHVVTNPGAEKRMFQV-KGERNVRVRQ 234
G N +GF V+ NP +KR+ Q+ N ++ Q
Sbjct: 360 GNNGNGFGDVILNPSLQKRVKQLANATANTKLHQ 393
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,557,107
Number of Sequences: 37544
Number of extensions: 325333
Number of successful extensions: 789
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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