Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H20
(472 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 69 1e-12
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 57 8e-09
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 50 7e-07
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 48 5e-06
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.090
SB_7858| Best HMM Match : Gelsolin (HMM E-Value=0.35) 31 0.64
SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11) 30 0.84
SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9) 30 1.1
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 29 2.6
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 28 3.4
SB_11640| Best HMM Match : Peptidase_C12 (HMM E-Value=3.6) 28 3.4
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_43353| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-07) 27 5.9
SB_47853| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4) 27 7.8
SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 27 7.8
SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2) 27 7.8
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 69.3 bits (162), Expect = 1e-12
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Frame = +1
Query: 4 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGA 183
G AA TV LD +QHRE G ES F YF S L L GG SGF HV
Sbjct: 537 GTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS-LTILKGGVDSGFRHVKPQE-Y 594
Query: 184 EKRMFQVKGE--RNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISM 357
+ R+ +V+G N V +V SS+ D FILD ++Y++VG + EK + +
Sbjct: 595 KPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKGLNLYLWVGVKCDKDEKFRGMQE 654
Query: 358 ANQIRDQDHNGRGRVEL 408
+I+ + NG+ + E+
Sbjct: 655 ILKIK-SERNGKPKSEV 670
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 56.8 bits (131), Expect = 8e-09
Identities = 32/72 (44%), Positives = 40/72 (55%)
Frame = +1
Query: 4 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGA 183
G AA TV LD VQHRE M HES+ F YF S + YL GG +GFN V
Sbjct: 583 GTAAYKTVELDTYLNDVPVQHREIMNHESDMFKTYFKS-ITYLKGGAETGFNQVKPKE-Y 640
Query: 184 EKRMFQVKGERN 219
+ R+ +V G++N
Sbjct: 641 KPRILKVSGDKN 652
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 253 SMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVELL 411
S+N+GD FILD +IY + G + VE++K I +A +IRD++ GR +V ++
Sbjct: 54 SLNKGDVFILDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHII 106
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 193 MFQVKGERNVRVRQVDPLI-SSMNQGDCFILDI-HYDIYVYVGERTKNVEKLKAI 351
M GE +R + PL S+++ DCFILD ++V+VG+ EK A+
Sbjct: 150 MSDASGELEMREIEAKPLKKSNLDTNDCFILDCGSSGVFVWVGKGCTKNEKSAAM 204
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +1
Query: 67 REAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGAEKRMFQVKGERNVRVRQVDPL 246
RE G ES F + F + + Y++GG SGF + V + R+F++ ++ V + V P
Sbjct: 284 REEQGDESEEFHELFDNDIAYIEGGTASGF-YSVEDQIYITRLFRLLKDKRVLLEPVLPD 342
Query: 247 ISSMNQGDCFILDIHYDIYVYVGER 321
+SS++ FILD IY++ G +
Sbjct: 343 VSSLDPTFTFILDAGLKIYIWSGAK 367
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +1
Query: 208 GERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQI---RDQ 378
G RN++ R ++P S N GDC++L +++ +VG+ +E+ K +A++I R+
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHANAIERAKVTEIASRIFTKREL 1516
Query: 379 DHNGRGRVELLAHYSNEVDTLK 444
D R + + S + D L+
Sbjct: 1517 DCKARD-IVFVEEKSQDEDNLR 1537
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/60 (18%), Positives = 30/60 (50%)
Frame = +1
Query: 241 PLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVELLAHY 420
P IS ++ + + D ++YV+ G+++ + ++ ++ Q+ + G G + + Y
Sbjct: 1598 PQISLLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQLYESSFKGHGPYDPIYPY 1657
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 33.5 bits (73), Expect = 0.090
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 61 QHREAMGHESNHFLQYFTSALQYLDGGNPSGFN---HVVTNPGAEKRMFQVKGERNVRVR 231
Q R E HFL+ F L L+GG +GF T KRMF VKG ++ +
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGFRAGCEEDTYDHEGKRMFHVKGTTDLNAK 97
Query: 232 QV 237
+
Sbjct: 98 AI 99
>SB_7858| Best HMM Match : Gelsolin (HMM E-Value=0.35)
Length = 103
Score = 30.7 bits (66), Expect = 0.64
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 256 MNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVELLAHYSNE 429
M D FI+D+ IY +VG EK KA I+D+ G + LL + + E
Sbjct: 1 MCNSDVFIVDLGLVIYQWVGCDASPFEKNKAAQYIQVIKDERSGGDIKTHLLENQTVE 58
>SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11)
Length = 862
Score = 30.3 bits (65), Expect = 0.84
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 164 TWLKPDGLPPSKYCSADVKYCRK--WLLSWPIASRCCTAAP 48
TW KPDG+P V +C + W ++ PI + + P
Sbjct: 388 TWQKPDGIPDKYIPGVSVSWCYQCDWEVTPPIVTETSVSVP 428
>SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 307
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 202 VKGERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTK 327
++ +R + R+ D +I + +G+C ++DI VGE+ K
Sbjct: 258 IQTDREIEARRPDIVIVNRKEGECIVIDIAVPGDANVGEKEK 299
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 10 AAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTS 117
AA V L K G VQ+REA G+E+ F + F S
Sbjct: 39 AAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/60 (18%), Positives = 30/60 (50%)
Frame = +1
Query: 241 PLISSMNQGDCFILDIHYDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVELLAHY 420
P IS ++ + + D ++YV+ G+++ + ++ ++ Q+ + G G + + Y
Sbjct: 43 PQISLLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQLYESSFKGHGPYDPIYPY 102
>SB_11640| Best HMM Match : Peptidase_C12 (HMM E-Value=3.6)
Length = 839
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -3
Query: 215 LSPLTWNIRFSAPGFVTTWLKPDGLPPSKYCSADVKYCRKWLLSWPIASRCCTAAPPNLS 36
L P I ++ GF LP S SA + RKW+ S P+ T PP+
Sbjct: 424 LDPFLRPIYYARGGFQGVTALHAKLPKS---SASIDRVRKWVSSKPVGGYTQTPPPPDTK 480
Query: 35 SRPTV 21
P V
Sbjct: 481 PYPPV 485
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 274 FILDIHYDIYVYVGERTKNVEKLKAISMANQIRDQDHNGRGRVELLAHYSNEV 432
F+ I+ +I+ ++G E + +A ++R++ GR RVE L+H + V
Sbjct: 1052 FVATIN-EIFAFIGSDPDTAETCSSFLLAARMRNE--RGRSRVEALSHMKDMV 1101
>SB_43353| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-07)
Length = 244
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 31 LDDKFGGAAVQHREAMGHESNHFLQYFTSALQYL 132
+DDKF G ++ S L YFT L YL
Sbjct: 74 VDDKFRGILAYCKQNQSEYSFQALDYFTGVLHYL 107
>SB_47853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 288 YVKDEAVALIHGRYQWVYLSHSNIPLAFNLEHTFLGTR 175
Y D+ AL +W SHS+ PL N+++ G+R
Sbjct: 1531 YCDDDQEALKRKIAEWEESSHSSQPLRLNVDNVKAGSR 1568
>SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4)
Length = 202
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 211 ERNVRVRQVDPLISSMNQGDCFILDIHYDIYVYVGERTK 327
+R ++ R+ D +I + +G+C ++DI V E+ K
Sbjct: 127 DREIQARRPDIVIVNRKEGECIVIDIAVPGDANVAEKEK 165
>SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 212
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 38 TSSVERRYNTARLWATRVTTSYSTSHLH-YNTWMGVTRPVSTTS*RIRVPRNV 193
T+ V+ + R T TTS +T H+H YNT +R V T + + R+V
Sbjct: 46 TALVQHQATPTRHVHTNNTTSQATRHVHTYNTTSQASRYVHTYNTTSQATRHV 98
>SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2)
Length = 298
Score = 27.1 bits (57), Expect = 7.8
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1
Query: 202 VKGERNVRVRQVDPLISSMNQGDCFILDI 288
++ +R ++ R+ D +I + +G+C ++DI
Sbjct: 259 IQTDREIQARRPDIVIVNRKEGECIVIDI 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,161,272
Number of Sequences: 59808
Number of extensions: 358519
Number of successful extensions: 1076
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 982083920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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