Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H19
(418 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 4e-21
SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 9e-05
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.88
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 1.2
SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2) 29 2.0
SB_40049| Best HMM Match : LRR_1 (HMM E-Value=0.082) 28 2.7
SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_46813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_28074| Best HMM Match : Helicase_C (HMM E-Value=4.2) 27 4.7
SB_56799| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_48312| Best HMM Match : OAR (HMM E-Value=2.8) 27 6.2
SB_47476| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 27 6.2
SB_20584| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_14913| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 6.2
SB_5214| Best HMM Match : SAP (HMM E-Value=0.8) 27 6.2
SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 6.2
SB_34445| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 6.2
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 27 6.2
SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65) 27 8.2
SB_10086| Best HMM Match : 7tm_1 (HMM E-Value=5.6e-11) 27 8.2
SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10) 27 8.2
SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 97.5 bits (232), Expect = 4e-21
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +1
Query: 148 LPDGK-VHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVG 324
+ +GK + G+I GL G++GFH+H GD + GC S G HFNP KEHG PSDENRHVG
Sbjct: 22 MAEGKPCKITGTIEGLKAGNHGFHIHVYGDNTNGCVSAGPHFNPFKKEHGGPSDENRHVG 81
Query: 325 DLGNAEFDKNYSSKIDMIDPHLAITGAHGIL 417
DLGN + + IDM D + + G H ++
Sbjct: 82 DLGNVVAGDDGKACIDMTDALVTLVGEHSVV 112
>SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 43.2 bits (97), Expect = 9e-05
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 289 HGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGIL 417
HG P D++RH+GDLGN E D N + + + D +++TG I+
Sbjct: 2 HGAPEDKDRHLGDLGNIEADANGIADVSITDCLVSLTGQCSII 44
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 29.9 bits (64), Expect = 0.88
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 127 GNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDI-----SGGCGSTGSHFNPENK 285
G ITFTRLP +V V L + FHV E +I + G + GSH N +NK
Sbjct: 560 GLITFTRLPPSQVQVFEGTHNLSL-TWSFHVVEGENIFTLSFNRGENTIGSHSNDDNK 616
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 251 PQPPDMSPFSWTWNP*WPGGSPTIDPSTWTLPSGSRVNVILPLMFSPT 108
P P MSP S +++P PG SP+ PS+ P+ + P +SPT
Sbjct: 421 PSSPSMSPASPSYSPTSPGYSPS-SPSSGYSPASPSYSPTSP-SYSPT 466
>SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2)
Length = 508
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 187 GLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRH 318
G P YG H G S G G + + + +GHPS H
Sbjct: 317 GHPSTRYGPHSTRYGHPSTGYGHPSTRYGHPSTRYGHPSTRYGH 360
>SB_40049| Best HMM Match : LRR_1 (HMM E-Value=0.082)
Length = 380
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 268 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHL 390
F PE E DEN GD+ N + D Y ++ DP L
Sbjct: 333 FYPEFDEEDDDDDENEFEGDMANGD-DHFYEDFLEAEDPAL 372
>SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/85 (24%), Positives = 30/85 (35%)
Frame = +1
Query: 67 HHERSQPTRAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGG 246
HH T + ++ GN T + HV+G+ PG+ HV G +
Sbjct: 829 HHVPGYTTHHVPGNTAHHVPGNTTHHVPGNTTYHVQGNTAHHVPGNKTHHV--PGYTTHH 886
Query: 247 CGSTGSHFNPENKEHGHPSDENRHV 321
+H P N H P HV
Sbjct: 887 VPGNTTHHVPGNTTHHVPGYTTHHV 911
>SB_46813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 173 VEGESVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 210
>SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1301
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 193 PPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVGDLGNAEFDKNY 357
P H H I G +G+ NKE H D+++ V LGN D+++
Sbjct: 344 PSNHNDKHASGSEGILFDTGKSGT----TNKEEPHEIDDHKKVESLGNLSSDEDF 394
>SB_28074| Best HMM Match : Helicase_C (HMM E-Value=4.2)
Length = 366
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 325 DLGNAEFDKNYSSKIDMIDPHLAI 396
DLG KN+++K+D I PHL I
Sbjct: 96 DLGIILLVKNFNAKLDNIGPHLKI 119
>SB_56799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 100 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 137
>SB_48312| Best HMM Match : OAR (HMM E-Value=2.8)
Length = 87
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 80 RSRHGLSPIWSGRTSEAILRSLGCLTAR 163
R+RHGL+P W T + R G T R
Sbjct: 47 RARHGLAPRWRPNTRSSFSRPSGPSTRR 74
>SB_47476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 132 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 169
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 891 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 928
>SB_20584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 173 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 210
>SB_14913| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 528
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 214 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 251
>SB_5214| Best HMM Match : SAP (HMM E-Value=0.8)
Length = 660
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 321 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 358
>SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 414
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 100 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 137
>SB_34445| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 371
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 169 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 282
VEG V G H+ DI GCG + HF N
Sbjct: 57 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 94
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Frame = +1
Query: 205 YGFHVHEK--GDI------SGGCGSTGSHFNPEN 282
+ +HVHEK GD G C S G H+NP N
Sbjct: 387 HNWHVHEKPVGDDMTKPVDDGRCSSLGPHYNPYN 420
>SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 80 RSRHGLSPIWSGRTSEAILRSLGCLTAR 163
R+RHGL+P W T + R G T R
Sbjct: 184 RARHGLAPRWRPNTRSSFSRPSGPSTRR 211
>SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65)
Length = 1799
Score = 26.6 bits (56), Expect = 8.2
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 260 PVEPQPPDMSPFSWTWNP*WPGGSPTIDPSTWTLPS---GSRVNVILPLMFSPT 108
PV+P P +S S T +PG +P ST++L +VILP + SP+
Sbjct: 236 PVQPLPAYLSTTSVTDLSGFPGQTPDQSVSTYSLAGQAMDGTQSVILPAVPSPS 289
>SB_10086| Best HMM Match : 7tm_1 (HMM E-Value=5.6e-11)
Length = 266
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 110 TRWAIARVGCERS*WPLTTTATAASKMYIIISYL 9
T W+IA + + WP + + ++MY+++SY+
Sbjct: 36 TPWSIAVLAVGK--WPFDLSIPSKTRMYVLLSYV 67
>SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10)
Length = 326
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 3/21 (14%)
Frame = +1
Query: 265 HFNPENKEHGHP---SDENRH 318
+F P++ EH HP SDEN+H
Sbjct: 51 YFIPKSVEHAHPVESSDENKH 71
>SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 202 HYGFHVHEKGDISGGCGSTGSHFNP-ENKEHGHPSDENRH 318
H G+ H+ GG S+G H +K GH D + H
Sbjct: 498 HQGYGRHDSHASHGGSVSSGRHREEYHHKRGGHSHDRHHH 537
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,208,254
Number of Sequences: 59808
Number of extensions: 269513
Number of successful extensions: 681
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 777158991
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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