Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H19
         (418 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.34 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   3.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.6  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   9.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   9.7  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +1

Query: 277 ENKEHGHPSDENRHVG--DLGNAEFDKNYSSKIDMIDPH 387
           +N ++ H +DENRH    D+ +       S  ID  + H
Sbjct: 229 DNSDYSHTTDENRHSSTLDIDHKMLTPIKSEPIDAYEMH 267


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 411 PVCSGNGEMRVDHINL 364
           PVC+ NG++  +H  L
Sbjct: 116 PVCASNGKIYANHCEL 131


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 95  LSPIWSGRTSEAILR 139
           L P+W G  SEA+ R
Sbjct: 224 LPPVWVGGESEALAR 238


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 140 NVILPLMFSPTRWAIARVGCERS*W 66
           +V   ++  P R AIA   CE S W
Sbjct: 394 DVXFRILTMPVRDAIAGTICENSAW 418


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 112 GENIRGNITFTRLPDGKVHVEGSIVGLPPG 201
           G+  RG +     PDG+  ++ +I  L PG
Sbjct: 645 GDVCRGKLKLP--PDGRTEIDVAIKTLKPG 672


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 162 LAVRQPSERNIASDVLPDQMGDSPCRLRAFM 70
           L +  P+E ++     P  +G S C++RA++
Sbjct: 90  LVLGLPNELSLFWQQYPWVLGVSLCKIRAYV 120


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 12/59 (20%), Positives = 21/59 (35%)
 Frame = +1

Query: 196 PGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKID 372
           P  Y  H         G  + G    P +  H H +   +H+         ++YSS ++
Sbjct: 323 PSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPTLSESYSSYVN 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,429
Number of Sequences: 438
Number of extensions: 2393
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)