BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0003_H18 (592 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A2QY32 Cluster: Complex: S. cerevisae Pom152 is part of... 33 5.0 >UniRef50_A2QY32 Cluster: Complex: S. cerevisae Pom152 is part of the nuclear pore complex; n=9; Eurotiomycetidae|Rep: Complex: S. cerevisae Pom152 is part of the nuclear pore complex - Aspergillus niger Length = 1255 Score = 33.1 bits (72), Expect = 5.0 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -2 Query: 489 YKRIHHESKISRRCMSKSNSAIILKEKLLS--TYYIIIINKRQRANRGRIACDTI 331 Y+ +H+ K +S+S A I+ EKL+S Y I++ + R+N R DTI Sbjct: 694 YELVHNGKKTKYSLVSESEMATIVTEKLVSGGEYAIVLTGVKDRSNCKRTLRDTI 748 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 421,912,823 Number of Sequences: 1657284 Number of extensions: 7175455 Number of successful extensions: 13005 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 12736 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13003 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 41073165837 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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