Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H18
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    27   0.12 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.9  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 290 FKRVILYKSFKYKKIVSQAIRPRFARCRLLII 385
           FK+++ YK  KY+K+  Q ++    R  L ++
Sbjct: 513 FKKIVTYKGGKYRKVTFQCLKSIAWRAFLAVL 544


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 347 IRPRFARCRLLIIII*YVDNSFSL 418
           +RP FA CRL  ++  Y    FSL
Sbjct: 11  LRPIFAVCRLFALVPYYNFEKFSL 34


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 370 TTGKPGSNRLRH 335
           T G P SNR+RH
Sbjct: 78  TIGSPISNRIRH 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,462
Number of Sequences: 336
Number of extensions: 1933
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)