Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H18
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          24   4.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   5.6  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   9.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.8  

>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 492 FYKRIHHESKISRRCMSKSNSAIILKEKLLSTY 394
           F + I++ S IS  C+  SNS    K   LS+Y
Sbjct: 55  FNREINYSSTISAICLPLSNSLRNRKHAGLSSY 87


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = +1

Query: 202  VRLSHRARASLAQVSSRRAGGASFHSTLLI*ESNSL*EF*V*KNSVASDSTPVCP 366
            VR +HR    +    SR+ G  +FH + +I       ++       +S   P CP
Sbjct: 910  VRWAHRLIPDIGAWQSRKHGEVNFHLSQIISGHGFFRKYLADMKFTSSPDCPNCP 964


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 219 GTSVPRASLLSPRRGRLIPFHIINLRE 299
           G S+P+ +LLS   G +  F+ I L+E
Sbjct: 350 GDSIPQRALLSCAFGAVFIFNYIPLQE 376


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 205 RLSHRARASLAQVSSRRAGGASFH 276
           R +HR   ++    SR+ G  SFH
Sbjct: 892 RWAHRVLPNIGSWQSRKHGDVSFH 915


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,843
Number of Sequences: 2352
Number of extensions: 7716
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)