Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H17
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   140   5e-34
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    86   2e-17
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    29   3.0  
Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical pr...    28   3.9  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  140 bits (340), Expect = 5e-34
 Identities = 76/173 (43%), Positives = 98/173 (56%), Gaps = 1/173 (0%)
 Frame = +2

Query: 41  LGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASL-PHVLRWYSHIAS 217
           + DVK+  GL   N  LAE+++ +G+  S  D ++F  +G  P AS  P+V RWY+++AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 218 YTPAERKTWSEGVSXXXXXXXXXXXXXXSNXXXXXXXXLFGSGXXXXXXXXXXXXXXXLK 397
           YT AERKTW+                            LFGS                L 
Sbjct: 62  YTDAERKTWASAGGSAPAAAAADGDDFD----------LFGSDDEEEDAEKAKIVEERLA 111

Query: 398 AYADKKSKKPALIAKSSIILDVKPWDDETDLKDMENQVRTIEMDGLLWGASKL 556
           AYA+KK+KK   IAKSS+ILDVKPWDDETDL +ME  VR+IEMDGL+WG +KL
Sbjct: 112 AYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKL 164


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 85.8 bits (203), Expect = 2e-17
 Identities = 43/75 (57%), Positives = 49/75 (65%)
 Frame = +2

Query: 332 LFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSIILDVKPWDDETDLKDMENQV 511
           LFGS                L AYA KK+ K   IAKSS+ILDVKPWDDETDL +ME  V
Sbjct: 140 LFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKLV 199

Query: 512 RTIEMDGLLWGASKL 556
           R+IEMDGL+WG +KL
Sbjct: 200 RSIEMDGLVWGGAKL 214


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 65  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 172
           G+N+LNQ L + +Y +G+  +++ I      GK+ A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 65  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 172
           G+N+LNQ L + +Y +G+  +++ +      GK+ A
Sbjct: 93  GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128


>Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical
           protein F34D10.3 protein.
          Length = 147

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 442 LCNKSGFLRLFVSICLKTFFTDSGCFCILF 353
           L N SG  + ++ +CL  F TD+ CF +LF
Sbjct: 27  LDNSSGD-KQYIFLCLIVFATDAACFGVLF 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,026,453
Number of Sequences: 27780
Number of extensions: 193490
Number of successful extensions: 502
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)