Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_H15
(541 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19611| Best HMM Match : No HMM Matches (HMM E-Value=.) 259 1e-69
SB_22058| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_20269| Best HMM Match : SOCS_box (HMM E-Value=4.6e-05) 30 1.4
SB_57115| Best HMM Match : HALZ (HMM E-Value=7.6) 29 2.4
SB_56062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_23193| Best HMM Match : Lipoprotein_17 (HMM E-Value=2.3) 29 2.4
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) 29 2.4
SB_15149| Best HMM Match : HALZ (HMM E-Value=7.6) 29 2.4
SB_53864| Best HMM Match : Herpes_US9 (HMM E-Value=2) 28 4.2
SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_28159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_3112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_43217| Best HMM Match : NUMOD3 (HMM E-Value=0.56) 28 5.6
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_34579| Best HMM Match : IncA (HMM E-Value=0.99) 27 7.4
SB_32366| Best HMM Match : Kinesin (HMM E-Value=0) 27 7.4
SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36) 27 7.4
SB_9681| Best HMM Match : IncA (HMM E-Value=0.58) 27 7.4
SB_3212| Best HMM Match : APC10 (HMM E-Value=0.36) 27 7.4
SB_34694| Best HMM Match : IncA (HMM E-Value=0.33) 27 9.8
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 27 9.8
SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_26153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_13434| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.52) 27 9.8
>SB_19611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 259 bits (634), Expect = 1e-69
Identities = 120/145 (82%), Positives = 135/145 (93%)
Frame = +3
Query: 105 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 284
MPPKFDPNEI+ V LRC GGEVGAT+SLAPKIGPLGLSPKKVGDDIAKAT DWKGLKITV
Sbjct: 1 MPPKFDPNEIQYVYLRCTGGEVGATASLAPKIGPLGLSPKKVGDDIAKATQDWKGLKITV 60
Query: 285 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMRPRS 464
L +QNRQA++SVVPSA++LII+ALKEPPRDRKK KNIKHNGNIT++DV +AK+MRPRS
Sbjct: 61 CLTIQNRQAKVSVVPSASSLIIKALKEPPRDRKKVKNIKHNGNITLDDVTNVAKVMRPRS 120
Query: 465 MARYLSGSVKEILGTAQSVGCTVEG 539
MAR+LSG+VKEILGT QSVGCTV+G
Sbjct: 121 MARHLSGTVKEILGTCQSVGCTVDG 145
>SB_22058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 31.5 bits (68), Expect = 0.46
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 202 PILGAKEDVAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLY 68
PIL AK+ + PT PP +LT ++ G+ G T +CN +Y
Sbjct: 121 PILPAKKLIYPTPPPNFRRLTGGLTQGNESG----TPFCNQNRVY 161
>SB_20269| Best HMM Match : SOCS_box (HMM E-Value=4.6e-05)
Length = 302
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 273 KITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKH 404
++ ++ + RQ + +PSA IR +E PR +K N+KH
Sbjct: 97 RVIIRAVGSRRQVEPLPLPSALKEWIREYEEEPRFDRKLTNLKH 140
>SB_57115| Best HMM Match : HALZ (HMM E-Value=7.6)
Length = 209
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 370 GGSLRALMISAAAEGTTEICACLFCTIN 287
GG L+ L++S G T ACL+C ++
Sbjct: 59 GGDLKFLLLSMGLSGATSDYACLWCIVH 86
>SB_56062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 370 GGSLRALMISAAAEGTTEICACLFCTIN 287
GG L+ L++S G T ACL+C ++
Sbjct: 459 GGDLKFLLLSMGLSGATSDYACLWCIVH 486
>SB_23193| Best HMM Match : Lipoprotein_17 (HMM E-Value=2.3)
Length = 711
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 370 GGSLRALMISAAAEGTTEICACLFCTIN 287
GG L+ L++S G T ACL+C ++
Sbjct: 459 GGDLKFLLLSMGLSGATSDYACLWCIVH 486
>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
Length = 2568
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 165 EVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPS 332
E+G T + + LG PK V +D +DW + I + I++ PS
Sbjct: 1793 ELGITDAEGNYVDSLGADPKAVSNDYVGYATDWVNNNLPENAITNSTWTGIALGPS 1848
>SB_15149| Best HMM Match : HALZ (HMM E-Value=7.6)
Length = 328
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 370 GGSLRALMISAAAEGTTEICACLFCTIN 287
GG L+ L++S G T ACL+C ++
Sbjct: 59 GGDLKFLLLSMGLSGATSDYACLWCIVH 86
>SB_53864| Best HMM Match : Herpes_US9 (HMM E-Value=2)
Length = 615
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 199 ILGAKEDVAP-TSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNN 62
+ + DV P T P TH+ T S+G ++ L C+ +++ +N
Sbjct: 397 VAASSSDVCPPTRPQTHMTPTAPASIGGDVQSFRLQKICDTQAVLDN 443
>SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 403 CLMFF-CFLRSRGGSLRALMISAAAEGTTEICACLFCTINWT 281
CL+ F CF RG +L+ ++ C +FC WT
Sbjct: 444 CLLHFTCFHPYRGKTLKTARLTVVQGRGRSCCKPVFCARRWT 485
>SB_28159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 201 GPLGLSPKKVGDDIAKATSDWKG 269
GPLG+ +++ D ++SDW G
Sbjct: 337 GPLGMEDRRIQDSQINSSSDWDG 359
>SB_3112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 389 EEH*TQWKYHNGRCHWHCQDNASSFNG-TLPLRLSKRNPWHSTI 517
EE +WK GRC W S ++P+ S R P H +
Sbjct: 84 EEEYRRWKLFYGRCSWTPAGLVRSVTSKSIPMSRSSRYPCHKHV 127
>SB_43217| Best HMM Match : NUMOD3 (HMM E-Value=0.56)
Length = 311
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = -1
Query: 283 TVILRPFQSLVALAMSSPTFFGERPRGPI-LGAKEDVAPTSPPTHLKLTILISLGSNLGG 107
T L P +AL F L AKE P TH+ T S+G ++
Sbjct: 82 TAKLDPLTGKIALVSKGVAFLNAELCALFGLEAKETAGVCPPQTHMTPTAPASIGGDVQS 141
Query: 106 IVLTNYCNNKSLYNN 62
L C+ +++ +N
Sbjct: 142 FRLQKICDTQAVLDN 156
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 382 LRSRGGSLRALMISAAAEGTTEICACLFCTINWTVILRP 266
+R +G SL++L+ + IC CL C I+ V+ P
Sbjct: 175 IRYKGKSLKSLIARGLIKVHPPICDCLGCRISSPVVASP 213
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 372 RDRKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSG 485
R R K+K+IK N + V + + PR++ R + G
Sbjct: 823 RSRSKEKDIKTNPTVQEAKVSAVTGVFVPRTITRTVQG 860
>SB_34579| Best HMM Match : IncA (HMM E-Value=0.99)
Length = 346
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 172 PTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNN 62
PT P TH+ T S+G ++ L C+ +++ +N
Sbjct: 138 PTRPQTHMTPTAPASIGGDVQSFRLQKICDTQAVLDN 174
>SB_32366| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1492
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = -3
Query: 296 HYQLDRDLETLPVTSGFSDVITNL-----FWGETKGTDFRSQGGRSTDFSTNTS 150
+Y + +PVT F D + N WG+ KG R G ++ NT+
Sbjct: 741 NYNFTKMFSFVPVTKQFQDYLVNSNLVIEVWGKQKGRKSRKPGAPASSQQKNTA 794
>SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36)
Length = 477
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 172 PTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNN 62
PT P TH+ T S+G ++ L C+ +++ +N
Sbjct: 21 PTRPQTHMTPTAPASIGGDVQSFRLQKICDTQAVLDN 57
>SB_9681| Best HMM Match : IncA (HMM E-Value=0.58)
Length = 215
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 172 PTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNN 62
PT P TH T S+G ++ L C+ +++++N
Sbjct: 5 PTCPQTHTTPTAPASIGGDVQSFRLQKICDTQAVHDN 41
>SB_3212| Best HMM Match : APC10 (HMM E-Value=0.36)
Length = 646
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 123 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVG 233
P+ +L+C G E TSS+ P +G LG K G
Sbjct: 597 PSMTNTTSLKCQGDEKSGTSSITP-LGSLGTYDKSHG 632
>SB_34694| Best HMM Match : IncA (HMM E-Value=0.33)
Length = 404
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 199 ILGAKEDVA-PTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNN 62
+ + DV PT P TH T S+G ++ L C+ +++ +N
Sbjct: 188 VAASSSDVCLPTCPQTHTTPTAPASIGGDVQSFRLQKICDTQAVLDN 234
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = +3
Query: 312 QISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIM 452
++S++PSAA++I + K P D + ++ T + G+ +++
Sbjct: 246 EVSIIPSAASIIRKESKTPAHDMMQIISVSKRLEETENSIEGLTELV 292
>SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1027
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 199 ILGAKEDVA-PTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNN 62
+ + DV PT P TH T S+G ++ L C+ +++ +N
Sbjct: 188 VAASSSDVCLPTCPQTHTTPTAPASIGGDVQSFRLQKICDTQAVLDN 234
>SB_26153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 415 IFPLCLMFFCFLR 377
I PLC+M FC+LR
Sbjct: 199 IIPLCIMVFCYLR 211
>SB_13434| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.52)
Length = 835
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = -1
Query: 421 IVIFPLCLMFFCFLRSRGGSLRALMISAAAEGTTEICACLFCTINWTVILRPFQSLVALA 242
+VIFP+CL+ F S+ G + A A L T+N T+ ++ ++S A+
Sbjct: 581 LVIFPICLIIIGF--SQFGDWSQFFLFACVAAVVLSIAGLM-TLNLTLSVKQYRSYDAVD 637
Query: 241 MSSP 230
S+P
Sbjct: 638 GSNP 641
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,603,512
Number of Sequences: 59808
Number of extensions: 325265
Number of successful extensions: 928
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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