Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_H12
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.4  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 204 VDPSIMGIGPVPAIENLLKVT 266
           V P I     VPA +NLLK T
Sbjct: 276 VGPEITRTDLVPAFQNLLKDT 296


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 132 PGLRLRHLYPMHCRR*RDLPS*KQVEVSSDPR-ASSAAEDA 13
           PG  + + Y + C R R +P  K+  + S PR     +EDA
Sbjct: 197 PGGSIANGYAISCARYRFMPDIKKKGLHSLPRLVLFTSEDA 237


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 157 LAASSLASTRAPAPSLIPDALPAVTRPSF 71
           +   ++A+      SL+   LPA  RPSF
Sbjct: 123 ITTDNVAAISGVLRSLLDRPLPAPERPSF 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,504
Number of Sequences: 336
Number of extensions: 2703
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)